Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3434 and Psest_3435 are separated by 15 nucleotides Psest_3435 and Psest_3436 are separated by 17 nucleotides Psest_3436 and Psest_3437 are separated by 12 nucleotides
Psest_3434: Psest_3434 - Serine phosphatase RsbU, regulator of sigma subunit, at 3,603,802 to 3,605,793
_3434
Psest_3435: Psest_3435 - hypothetical protein, at 3,605,809 to 3,606,351
_3435
Psest_3436: Psest_3436 - Domain of unknown function (DUF1987)., at 3,606,369 to 3,606,746
_3436
Psest_3437: Psest_3437 - diguanylate cyclase (GGDEF) domain, at 3,606,759 to 3,607,544
_3437
Position (kb)
3605
3606
3607 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3604.873 kb on + strand, within Psest_3434 at 3604.880 kb on + strand, within Psest_3434 at 3604.880 kb on + strand, within Psest_3434 at 3604.881 kb on - strand, within Psest_3434 at 3604.881 kb on - strand, within Psest_3434 at 3605.066 kb on - strand, within Psest_3434 at 3605.176 kb on + strand, within Psest_3434 at 3605.176 kb on + strand, within Psest_3434 at 3605.176 kb on + strand, within Psest_3434 at 3605.176 kb on + strand, within Psest_3434 at 3605.176 kb on + strand, within Psest_3434 at 3605.176 kb on + strand, within Psest_3434 at 3605.176 kb on + strand, within Psest_3434 at 3605.176 kb on + strand, within Psest_3434 at 3605.176 kb on + strand, within Psest_3434 at 3605.176 kb on + strand, within Psest_3434 at 3605.176 kb on + strand, within Psest_3434 at 3605.176 kb on + strand, within Psest_3434 at 3605.176 kb on + strand, within Psest_3434 at 3605.176 kb on + strand, within Psest_3434 at 3605.176 kb on + strand, within Psest_3434 at 3605.176 kb on + strand, within Psest_3434 at 3605.176 kb on + strand, within Psest_3434 at 3605.176 kb on + strand, within Psest_3434 at 3605.176 kb on + strand, within Psest_3434 at 3605.176 kb on + strand, within Psest_3434 at 3605.176 kb on + strand, within Psest_3434 at 3605.176 kb on + strand, within Psest_3434 at 3605.177 kb on - strand, within Psest_3434 at 3605.177 kb on - strand, within Psest_3434 at 3605.177 kb on - strand, within Psest_3434 at 3605.177 kb on - strand, within Psest_3434 at 3605.177 kb on - strand, within Psest_3434 at 3605.177 kb on - strand, within Psest_3434 at 3605.177 kb on - strand, within Psest_3434 at 3605.177 kb on - strand, within Psest_3434 at 3605.177 kb on - strand, within Psest_3434 at 3605.177 kb on - strand, within Psest_3434 at 3605.177 kb on - strand, within Psest_3434 at 3605.177 kb on - strand, within Psest_3434 at 3605.177 kb on - strand, within Psest_3434 at 3605.177 kb on - strand, within Psest_3434 at 3605.177 kb on - strand, within Psest_3434 at 3605.177 kb on - strand, within Psest_3434 at 3605.177 kb on - strand, within Psest_3434 at 3605.177 kb on - strand, within Psest_3434 at 3605.182 kb on + strand, within Psest_3434 at 3605.217 kb on - strand, within Psest_3434 at 3605.217 kb on - strand, within Psest_3434 at 3605.416 kb on + strand, within Psest_3434 at 3605.416 kb on + strand, within Psest_3434 at 3605.416 kb on + strand, within Psest_3434 at 3605.416 kb on + strand, within Psest_3434 at 3605.417 kb on - strand, within Psest_3434 at 3605.417 kb on - strand, within Psest_3434 at 3605.417 kb on - strand, within Psest_3434 at 3605.417 kb on - strand, within Psest_3434 at 3605.417 kb on - strand, within Psest_3434 at 3605.417 kb on - strand, within Psest_3434 at 3605.470 kb on + strand, within Psest_3434 at 3605.471 kb on - strand, within Psest_3434 at 3605.473 kb on + strand, within Psest_3434 at 3605.473 kb on + strand, within Psest_3434 at 3605.474 kb on - strand, within Psest_3434 at 3605.587 kb on + strand, within Psest_3434 at 3605.587 kb on + strand, within Psest_3434 at 3605.587 kb on + strand, within Psest_3434 at 3605.587 kb on + strand, within Psest_3434 at 3605.587 kb on + strand, within Psest_3434 at 3605.587 kb on + strand, within Psest_3434 at 3605.587 kb on + strand, within Psest_3434 at 3605.587 kb on + strand, within Psest_3434 at 3605.587 kb on + strand, within Psest_3434 at 3605.587 kb on + strand, within Psest_3434 at 3605.587 kb on + strand, within Psest_3434 at 3605.588 kb on - strand, within Psest_3434 at 3605.588 kb on - strand, within Psest_3434 at 3605.588 kb on - strand, within Psest_3434 at 3605.588 kb on - strand, within Psest_3434 at 3605.588 kb on - strand, within Psest_3434 at 3605.588 kb on - strand, within Psest_3434 at 3605.588 kb on - strand, within Psest_3434 at 3605.588 kb on - strand, within Psest_3434 at 3605.588 kb on - strand, within Psest_3434 at 3605.734 kb on + strand at 3605.746 kb on + strand at 3605.774 kb on + strand at 3605.774 kb on + strand at 3605.774 kb on + strand at 3605.774 kb on + strand at 3605.774 kb on + strand at 3605.774 kb on + strand at 3605.774 kb on + strand at 3605.775 kb on - strand at 3605.775 kb on - strand at 3605.775 kb on - strand at 3605.775 kb on - strand at 3605.775 kb on - strand at 3605.775 kb on - strand at 3605.775 kb on - strand at 3605.846 kb on - strand at 3605.910 kb on - strand, within Psest_3435 at 3605.910 kb on - strand, within Psest_3435 at 3605.929 kb on + strand, within Psest_3435 at 3605.929 kb on + strand, within Psest_3435 at 3605.929 kb on + strand, within Psest_3435 at 3605.930 kb on - strand, within Psest_3435 at 3605.930 kb on - strand, within Psest_3435 at 3605.930 kb on - strand, within Psest_3435 at 3605.930 kb on - strand, within Psest_3435 at 3605.930 kb on - strand, within Psest_3435 at 3605.984 kb on - strand, within Psest_3435 at 3606.013 kb on + strand, within Psest_3435 at 3606.014 kb on - strand, within Psest_3435 at 3606.088 kb on + strand, within Psest_3435 at 3606.089 kb on - strand, within Psest_3435 at 3606.089 kb on - strand, within Psest_3435 at 3606.193 kb on + strand, within Psest_3435 at 3606.194 kb on - strand, within Psest_3435 at 3606.194 kb on - strand, within Psest_3435 at 3606.474 kb on + strand, within Psest_3436 at 3606.474 kb on + strand, within Psest_3436 at 3606.475 kb on - strand, within Psest_3436 at 3606.495 kb on + strand, within Psest_3436 at 3606.495 kb on + strand, within Psest_3436 at 3606.496 kb on - strand, within Psest_3436 at 3606.496 kb on - strand, within Psest_3436 at 3606.496 kb on - strand, within Psest_3436 at 3606.496 kb on - strand, within Psest_3436 at 3606.496 kb on - strand, within Psest_3436 at 3606.561 kb on + strand, within Psest_3436 at 3606.562 kb on - strand, within Psest_3436 at 3606.562 kb on - strand, within Psest_3436 at 3606.562 kb on - strand, within Psest_3436 at 3606.562 kb on - strand, within Psest_3436 at 3606.621 kb on + strand, within Psest_3436 at 3606.657 kb on + strand, within Psest_3436 at 3606.657 kb on + strand, within Psest_3436 at 3606.658 kb on - strand, within Psest_3436 at 3606.658 kb on - strand, within Psest_3436 at 3606.758 kb on + strand at 3606.759 kb on - strand at 3606.759 kb on - strand at 3607.140 kb on + strand, within Psest_3437
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 3,604,873 + Psest_3434 0.54 +2.2 3,604,880 + Psest_3434 0.54 -0.2 3,604,880 + Psest_3434 0.54 +0.1 3,604,881 - Psest_3434 0.54 -0.2 3,604,881 - Psest_3434 0.54 +1.6 3,605,066 - Psest_3434 0.63 -0.1 3,605,176 + Psest_3434 0.69 +0.9 3,605,176 + Psest_3434 0.69 +0.7 3,605,176 + Psest_3434 0.69 -2.4 3,605,176 + Psest_3434 0.69 +0.8 3,605,176 + Psest_3434 0.69 +0.2 3,605,176 + Psest_3434 0.69 +1.0 3,605,176 + Psest_3434 0.69 +0.8 3,605,176 + Psest_3434 0.69 +0.4 3,605,176 + Psest_3434 0.69 -0.6 3,605,176 + Psest_3434 0.69 +1.1 3,605,176 + Psest_3434 0.69 +1.6 3,605,176 + Psest_3434 0.69 +0.2 3,605,176 + Psest_3434 0.69 +1.4 3,605,176 + Psest_3434 0.69 +1.6 3,605,176 + Psest_3434 0.69 +1.3 3,605,176 + Psest_3434 0.69 -0.6 3,605,176 + Psest_3434 0.69 -0.8 3,605,176 + Psest_3434 0.69 +0.1 3,605,176 + Psest_3434 0.69 +0.4 3,605,176 + Psest_3434 0.69 +0.5 3,605,176 + Psest_3434 0.69 +0.6 3,605,176 + Psest_3434 0.69 +2.4 3,605,177 - Psest_3434 0.69 +0.2 3,605,177 - Psest_3434 0.69 +1.4 3,605,177 - Psest_3434 0.69 +1.6 3,605,177 - Psest_3434 0.69 +0.3 3,605,177 - Psest_3434 0.69 +1.1 3,605,177 - Psest_3434 0.69 +1.1 3,605,177 - Psest_3434 0.69 +2.0 3,605,177 - Psest_3434 0.69 +0.3 3,605,177 - Psest_3434 0.69 +0.1 3,605,177 - Psest_3434 0.69 +0.7 3,605,177 - Psest_3434 0.69 +0.7 3,605,177 - Psest_3434 0.69 +0.9 3,605,177 - Psest_3434 0.69 +0.2 3,605,177 - Psest_3434 0.69 +0.6 3,605,177 - Psest_3434 0.69 -0.7 3,605,177 - Psest_3434 0.69 +0.5 3,605,177 - Psest_3434 0.69 +1.0 3,605,177 - Psest_3434 0.69 -1.0 3,605,182 + Psest_3434 0.69 +0.6 3,605,217 - Psest_3434 0.71 +1.2 3,605,217 - Psest_3434 0.71 +0.4 3,605,416 + Psest_3434 0.81 +0.9 3,605,416 + Psest_3434 0.81 +0.4 3,605,416 + Psest_3434 0.81 +0.6 3,605,416 + Psest_3434 0.81 +0.3 3,605,417 - Psest_3434 0.81 +2.0 3,605,417 - Psest_3434 0.81 +1.2 3,605,417 - Psest_3434 0.81 -1.7 3,605,417 - Psest_3434 0.81 +1.6 3,605,417 - Psest_3434 0.81 +0.8 3,605,417 - Psest_3434 0.81 +0.0 3,605,470 + Psest_3434 0.84 +1.1 3,605,471 - Psest_3434 0.84 +0.2 3,605,473 + Psest_3434 0.84 -0.5 3,605,473 + Psest_3434 0.84 +1.1 3,605,474 - Psest_3434 0.84 +1.2 3,605,587 + Psest_3434 0.90 +2.1 3,605,587 + Psest_3434 0.90 +0.8 3,605,587 + Psest_3434 0.90 +0.6 3,605,587 + Psest_3434 0.90 +0.4 3,605,587 + Psest_3434 0.90 -0.2 3,605,587 + Psest_3434 0.90 +0.6 3,605,587 + Psest_3434 0.90 +1.0 3,605,587 + Psest_3434 0.90 +0.8 3,605,587 + Psest_3434 0.90 +1.5 3,605,587 + Psest_3434 0.90 +0.6 3,605,587 + Psest_3434 0.90 -1.2 3,605,588 - Psest_3434 0.90 -0.0 3,605,588 - Psest_3434 0.90 +1.6 3,605,588 - Psest_3434 0.90 +0.9 3,605,588 - Psest_3434 0.90 +0.8 3,605,588 - Psest_3434 0.90 +0.6 3,605,588 - Psest_3434 0.90 +0.8 3,605,588 - Psest_3434 0.90 +0.5 3,605,588 - Psest_3434 0.90 +0.4 3,605,588 - Psest_3434 0.90 +0.2 3,605,734 + +1.0 3,605,746 + +0.1 3,605,774 + +0.7 3,605,774 + +0.7 3,605,774 + +0.5 3,605,774 + -0.4 3,605,774 + -0.1 3,605,774 + +0.9 3,605,774 + +1.0 3,605,775 - +1.1 3,605,775 - +0.7 3,605,775 - +1.0 3,605,775 - +0.6 3,605,775 - +0.2 3,605,775 - +1.8 3,605,775 - -1.0 3,605,846 - +0.7 3,605,910 - Psest_3435 0.19 +0.9 3,605,910 - Psest_3435 0.19 +0.6 3,605,929 + Psest_3435 0.22 -2.2 3,605,929 + Psest_3435 0.22 -3.0 3,605,929 + Psest_3435 0.22 -0.6 3,605,930 - Psest_3435 0.22 -1.4 3,605,930 - Psest_3435 0.22 +0.7 3,605,930 - Psest_3435 0.22 +0.6 3,605,930 - Psest_3435 0.22 +0.7 3,605,930 - Psest_3435 0.22 +0.3 3,605,984 - Psest_3435 0.32 +0.6 3,606,013 + Psest_3435 0.38 -2.3 3,606,014 - Psest_3435 0.38 +0.6 3,606,088 + Psest_3435 0.51 -2.2 3,606,089 - Psest_3435 0.52 +0.8 3,606,089 - Psest_3435 0.52 +0.7 3,606,193 + Psest_3435 0.71 -3.0 3,606,194 - Psest_3435 0.71 +0.2 3,606,194 - Psest_3435 0.71 -1.8 3,606,474 + Psest_3436 0.28 +0.2 3,606,474 + Psest_3436 0.28 +0.7 3,606,475 - Psest_3436 0.28 +0.9 3,606,495 + Psest_3436 0.33 +1.5 3,606,495 + Psest_3436 0.33 +0.7 3,606,496 - Psest_3436 0.34 +0.0 3,606,496 - Psest_3436 0.34 +1.2 3,606,496 - Psest_3436 0.34 +0.3 3,606,496 - Psest_3436 0.34 +0.3 3,606,496 - Psest_3436 0.34 +0.8 3,606,561 + Psest_3436 0.51 +1.0 3,606,562 - Psest_3436 0.51 +0.1 3,606,562 - Psest_3436 0.51 +0.9 3,606,562 - Psest_3436 0.51 +0.0 3,606,562 - Psest_3436 0.51 +0.6 3,606,621 + Psest_3436 0.67 +0.7 3,606,657 + Psest_3436 0.76 +0.1 3,606,657 + Psest_3436 0.76 +0.0 3,606,658 - Psest_3436 0.76 +1.2 3,606,658 - Psest_3436 0.76 +0.5 3,606,758 + +0.2 3,606,759 - +0.9 3,606,759 - -0.2 3,607,140 + Psest_3437 0.48 +0.4
Or see this region's nucleotide sequence