Experiment: 3-octanone 6.3476 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS31940 and AZOBR_RS31945 are separated by 162 nucleotides AZOBR_RS31945 and AZOBR_RS31950 are separated by 41 nucleotides
AZOBR_RS31940: AZOBR_RS31940 - NADH-quinone oxidoreductase subunit F, at 531,320 to 533,005
_RS31940
AZOBR_RS31945: AZOBR_RS31945 - oxalyl-CoA decarboxylase, at 533,168 to 534,925
_RS31945
AZOBR_RS31950: AZOBR_RS31950 - GntR family transcriptional regulator, at 534,967 to 535,656
_RS31950
Position (kb) 533
534
535 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 532.239 kb on + strand, within AZOBR_RS31940 at 532.239 kb on + strand, within AZOBR_RS31940 at 532.240 kb on - strand, within AZOBR_RS31940 at 532.240 kb on - strand, within AZOBR_RS31940 at 532.240 kb on - strand, within AZOBR_RS31940 at 532.243 kb on - strand, within AZOBR_RS31940 at 532.243 kb on - strand, within AZOBR_RS31940 at 532.243 kb on - strand, within AZOBR_RS31940 at 532.243 kb on - strand, within AZOBR_RS31940 at 532.243 kb on - strand, within AZOBR_RS31940 at 532.461 kb on + strand, within AZOBR_RS31940 at 532.461 kb on + strand, within AZOBR_RS31940 at 532.462 kb on - strand, within AZOBR_RS31940 at 532.479 kb on + strand, within AZOBR_RS31940 at 532.479 kb on + strand, within AZOBR_RS31940 at 532.479 kb on + strand, within AZOBR_RS31940 at 532.479 kb on + strand, within AZOBR_RS31940 at 532.479 kb on + strand, within AZOBR_RS31940 at 532.479 kb on + strand, within AZOBR_RS31940 at 532.479 kb on + strand, within AZOBR_RS31940 at 532.479 kb on + strand, within AZOBR_RS31940 at 532.479 kb on + strand, within AZOBR_RS31940 at 532.479 kb on + strand, within AZOBR_RS31940 at 532.479 kb on + strand, within AZOBR_RS31940 at 532.480 kb on - strand, within AZOBR_RS31940 at 532.480 kb on - strand, within AZOBR_RS31940 at 532.480 kb on - strand, within AZOBR_RS31940 at 532.480 kb on - strand, within AZOBR_RS31940 at 532.480 kb on - strand, within AZOBR_RS31940 at 532.480 kb on - strand, within AZOBR_RS31940 at 532.765 kb on - strand, within AZOBR_RS31940 at 532.765 kb on - strand, within AZOBR_RS31940 at 532.782 kb on + strand, within AZOBR_RS31940 at 532.782 kb on + strand, within AZOBR_RS31940 at 532.782 kb on + strand, within AZOBR_RS31940 at 532.782 kb on + strand, within AZOBR_RS31940 at 532.782 kb on + strand, within AZOBR_RS31940 at 532.783 kb on - strand, within AZOBR_RS31940 at 532.851 kb on + strand at 532.852 kb on - strand at 533.087 kb on + strand at 533.153 kb on + strand at 533.154 kb on - strand at 533.154 kb on - strand at 533.158 kb on + strand at 533.169 kb on + strand at 533.169 kb on + strand at 533.170 kb on - strand at 533.170 kb on - strand at 533.170 kb on - strand at 533.308 kb on - strand at 533.442 kb on + strand, within AZOBR_RS31945 at 533.442 kb on + strand, within AZOBR_RS31945 at 533.442 kb on + strand, within AZOBR_RS31945 at 533.443 kb on - strand, within AZOBR_RS31945 at 533.443 kb on - strand, within AZOBR_RS31945 at 533.443 kb on - strand, within AZOBR_RS31945 at 533.443 kb on - strand, within AZOBR_RS31945 at 533.443 kb on - strand, within AZOBR_RS31945 at 533.443 kb on - strand, within AZOBR_RS31945 at 533.443 kb on - strand, within AZOBR_RS31945 at 533.488 kb on - strand, within AZOBR_RS31945 at 533.488 kb on - strand, within AZOBR_RS31945 at 534.397 kb on - strand, within AZOBR_RS31945 at 534.531 kb on + strand, within AZOBR_RS31945 at 534.531 kb on + strand, within AZOBR_RS31945 at 534.531 kb on + strand, within AZOBR_RS31945 at 534.532 kb on - strand, within AZOBR_RS31945 at 534.804 kb on + strand at 534.804 kb on + strand at 534.804 kb on + strand at 534.804 kb on + strand at 534.804 kb on + strand at 534.804 kb on + strand at 534.805 kb on - strand at 534.805 kb on - strand at 534.925 kb on + strand at 534.925 kb on + strand at 534.925 kb on + strand at 534.925 kb on + strand at 534.925 kb on + strand at 534.926 kb on - strand at 534.932 kb on + strand at 534.933 kb on - strand at 534.933 kb on - strand at 534.949 kb on + strand at 534.950 kb on - strand at 535.553 kb on + strand, within AZOBR_RS31950 at 535.553 kb on + strand, within AZOBR_RS31950 at 535.554 kb on - strand, within AZOBR_RS31950 at 535.554 kb on - strand, within AZOBR_RS31950 at 535.554 kb on - strand, within AZOBR_RS31950 at 535.554 kb on - strand, within AZOBR_RS31950 at 535.593 kb on - strand at 535.593 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 6.3476 mM remove 532,239 + AZOBR_RS31940 0.55 +0.1 532,239 + AZOBR_RS31940 0.55 +0.9 532,240 - AZOBR_RS31940 0.55 +1.2 532,240 - AZOBR_RS31940 0.55 +1.5 532,240 - AZOBR_RS31940 0.55 +0.4 532,243 - AZOBR_RS31940 0.55 +0.0 532,243 - AZOBR_RS31940 0.55 +0.3 532,243 - AZOBR_RS31940 0.55 +0.5 532,243 - AZOBR_RS31940 0.55 -1.1 532,243 - AZOBR_RS31940 0.55 +1.2 532,461 + AZOBR_RS31940 0.68 -2.6 532,461 + AZOBR_RS31940 0.68 +0.5 532,462 - AZOBR_RS31940 0.68 -0.8 532,479 + AZOBR_RS31940 0.69 +0.6 532,479 + AZOBR_RS31940 0.69 +0.0 532,479 + AZOBR_RS31940 0.69 -2.2 532,479 + AZOBR_RS31940 0.69 -0.1 532,479 + AZOBR_RS31940 0.69 +0.5 532,479 + AZOBR_RS31940 0.69 -0.3 532,479 + AZOBR_RS31940 0.69 +1.9 532,479 + AZOBR_RS31940 0.69 -1.2 532,479 + AZOBR_RS31940 0.69 +1.7 532,479 + AZOBR_RS31940 0.69 -0.1 532,479 + AZOBR_RS31940 0.69 +0.2 532,480 - AZOBR_RS31940 0.69 +0.1 532,480 - AZOBR_RS31940 0.69 -1.3 532,480 - AZOBR_RS31940 0.69 -0.5 532,480 - AZOBR_RS31940 0.69 +0.5 532,480 - AZOBR_RS31940 0.69 -1.8 532,480 - AZOBR_RS31940 0.69 +0.5 532,765 - AZOBR_RS31940 0.86 +0.2 532,765 - AZOBR_RS31940 0.86 +1.1 532,782 + AZOBR_RS31940 0.87 +3.5 532,782 + AZOBR_RS31940 0.87 -0.2 532,782 + AZOBR_RS31940 0.87 -0.2 532,782 + AZOBR_RS31940 0.87 +0.8 532,782 + AZOBR_RS31940 0.87 -1.3 532,783 - AZOBR_RS31940 0.87 -2.3 532,851 + +0.0 532,852 - -0.1 533,087 + -1.9 533,153 + -0.4 533,154 - +0.3 533,154 - -4.1 533,158 + +1.1 533,169 + +0.4 533,169 + +1.5 533,170 - +0.2 533,170 - -0.7 533,170 - -0.1 533,308 - +0.0 533,442 + AZOBR_RS31945 0.16 -0.0 533,442 + AZOBR_RS31945 0.16 -0.7 533,442 + AZOBR_RS31945 0.16 -2.7 533,443 - AZOBR_RS31945 0.16 -0.6 533,443 - AZOBR_RS31945 0.16 +0.6 533,443 - AZOBR_RS31945 0.16 -0.4 533,443 - AZOBR_RS31945 0.16 +0.7 533,443 - AZOBR_RS31945 0.16 -1.4 533,443 - AZOBR_RS31945 0.16 -0.2 533,443 - AZOBR_RS31945 0.16 -0.8 533,488 - AZOBR_RS31945 0.18 +2.1 533,488 - AZOBR_RS31945 0.18 -0.1 534,397 - AZOBR_RS31945 0.70 +0.3 534,531 + AZOBR_RS31945 0.78 +4.2 534,531 + AZOBR_RS31945 0.78 -0.1 534,531 + AZOBR_RS31945 0.78 -2.3 534,532 - AZOBR_RS31945 0.78 -2.2 534,804 + -2.8 534,804 + -2.5 534,804 + -0.6 534,804 + -2.2 534,804 + -0.4 534,804 + +0.6 534,805 - +0.1 534,805 - +1.4 534,925 + -0.5 534,925 + -1.3 534,925 + +1.5 534,925 + -0.8 534,925 + +1.8 534,926 - -0.5 534,932 + -0.6 534,933 - -2.0 534,933 - -1.1 534,949 + -0.0 534,950 - +0.7 535,553 + AZOBR_RS31950 0.85 +0.1 535,553 + AZOBR_RS31950 0.85 -1.9 535,554 - AZOBR_RS31950 0.85 -0.5 535,554 - AZOBR_RS31950 0.85 +0.3 535,554 - AZOBR_RS31950 0.85 -1.1 535,554 - AZOBR_RS31950 0.85 -1.9 535,593 - -0.1 535,593 - +0.2
Or see this region's nucleotide sequence