Experiment: 3-octanone 6.3476 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS31245 and AZOBR_RS31250 overlap by 4 nucleotides AZOBR_RS31250 and AZOBR_RS31255 are separated by 8 nucleotides
AZOBR_RS31245: AZOBR_RS31245 - ABC transporter ATP-binding protein, at 374,388 to 375,944
_RS31245
AZOBR_RS31250: AZOBR_RS31250 - ABC transporter permease, at 375,941 to 377,152
_RS31250
AZOBR_RS31255: AZOBR_RS31255 - galactose 1-dehydrogenase, at 377,161 to 378,138
_RS31255
Position (kb) 375
376
377
378 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 375.720 kb on + strand, within AZOBR_RS31245 at 375.720 kb on + strand, within AZOBR_RS31245 at 375.721 kb on - strand, within AZOBR_RS31245 at 375.729 kb on + strand, within AZOBR_RS31245 at 375.729 kb on + strand, within AZOBR_RS31245 at 375.729 kb on + strand, within AZOBR_RS31245 at 375.730 kb on - strand, within AZOBR_RS31245 at 375.730 kb on - strand, within AZOBR_RS31245 at 375.822 kb on + strand at 375.823 kb on - strand at 375.823 kb on - strand at 375.823 kb on - strand at 376.065 kb on - strand, within AZOBR_RS31250 at 376.065 kb on - strand, within AZOBR_RS31250 at 376.127 kb on + strand, within AZOBR_RS31250 at 376.127 kb on + strand, within AZOBR_RS31250 at 376.127 kb on + strand, within AZOBR_RS31250 at 376.128 kb on - strand, within AZOBR_RS31250 at 376.128 kb on - strand, within AZOBR_RS31250 at 376.128 kb on - strand, within AZOBR_RS31250 at 376.128 kb on - strand, within AZOBR_RS31250 at 376.128 kb on - strand, within AZOBR_RS31250 at 376.128 kb on - strand, within AZOBR_RS31250 at 376.658 kb on + strand, within AZOBR_RS31250 at 376.658 kb on + strand, within AZOBR_RS31250 at 376.658 kb on + strand, within AZOBR_RS31250 at 376.658 kb on + strand, within AZOBR_RS31250 at 376.658 kb on + strand, within AZOBR_RS31250 at 376.659 kb on - strand at 376.659 kb on - strand, within AZOBR_RS31250 at 376.659 kb on - strand, within AZOBR_RS31250 at 376.733 kb on + strand, within AZOBR_RS31250 at 376.734 kb on - strand, within AZOBR_RS31250 at 376.734 kb on - strand, within AZOBR_RS31250 at 376.841 kb on + strand, within AZOBR_RS31250 at 377.132 kb on + strand at 377.132 kb on + strand at 377.133 kb on - strand at 377.133 kb on - strand at 377.923 kb on - strand, within AZOBR_RS31255 at 378.004 kb on + strand, within AZOBR_RS31255 at 378.004 kb on + strand, within AZOBR_RS31255 at 378.016 kb on + strand, within AZOBR_RS31255 at 378.017 kb on - strand, within AZOBR_RS31255 at 378.136 kb on + strand at 378.136 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 6.3476 mM remove 375,720 + AZOBR_RS31245 0.86 +1.1 375,720 + AZOBR_RS31245 0.86 +0.1 375,721 - AZOBR_RS31245 0.86 -2.5 375,729 + AZOBR_RS31245 0.86 +1.3 375,729 + AZOBR_RS31245 0.86 +0.8 375,729 + AZOBR_RS31245 0.86 +1.0 375,730 - AZOBR_RS31245 0.86 +0.4 375,730 - AZOBR_RS31245 0.86 -2.8 375,822 + -0.8 375,823 - -1.0 375,823 - -0.1 375,823 - -1.3 376,065 - AZOBR_RS31250 0.10 -0.4 376,065 - AZOBR_RS31250 0.10 -1.2 376,127 + AZOBR_RS31250 0.15 +0.6 376,127 + AZOBR_RS31250 0.15 -1.3 376,127 + AZOBR_RS31250 0.15 +0.6 376,128 - AZOBR_RS31250 0.15 +1.4 376,128 - AZOBR_RS31250 0.15 +1.4 376,128 - AZOBR_RS31250 0.15 +1.8 376,128 - AZOBR_RS31250 0.15 +3.4 376,128 - AZOBR_RS31250 0.15 +1.7 376,128 - AZOBR_RS31250 0.15 +0.0 376,658 + AZOBR_RS31250 0.59 -0.4 376,658 + AZOBR_RS31250 0.59 +0.5 376,658 + AZOBR_RS31250 0.59 -0.2 376,658 + AZOBR_RS31250 0.59 +0.4 376,658 + AZOBR_RS31250 0.59 +0.7 376,659 - +1.4 376,659 - AZOBR_RS31250 0.59 -1.1 376,659 - AZOBR_RS31250 0.59 -1.1 376,733 + AZOBR_RS31250 0.65 +1.1 376,734 - AZOBR_RS31250 0.65 +2.0 376,734 - AZOBR_RS31250 0.65 +0.7 376,841 + AZOBR_RS31250 0.74 +1.9 377,132 + -0.3 377,132 + +1.0 377,133 - -1.6 377,133 - +0.4 377,923 - AZOBR_RS31255 0.78 +1.0 378,004 + AZOBR_RS31255 0.86 -0.9 378,004 + AZOBR_RS31255 0.86 +1.1 378,016 + AZOBR_RS31255 0.87 -1.5 378,017 - AZOBR_RS31255 0.88 -1.3 378,136 + -1.8 378,136 + -2.0
Or see this region's nucleotide sequence