Experiment: 3-octanone 6.3476 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS26790 and AZOBR_RS26795 are separated by 146 nucleotides AZOBR_RS26795 and AZOBR_RS26800 overlap by 4 nucleotides AZOBR_RS26800 and AZOBR_RS26805 are separated by 427 nucleotides
AZOBR_RS26790: AZOBR_RS26790 - copper-containing nitrite reductase, at 160,397 to 161,461
_RS26790
AZOBR_RS26795: AZOBR_RS26795 - hypothetical protein, at 161,608 to 162,234
_RS26795
AZOBR_RS26800: AZOBR_RS26800 - hypothetical protein, at 162,231 to 162,803
_RS26800
AZOBR_RS26805: AZOBR_RS26805 - malonyl-CoA synthase, at 163,231 to 164,769
_RS26805
Position (kb)
162
163 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 161.321 kb on + strand, within AZOBR_RS26790 at 161.321 kb on + strand, within AZOBR_RS26790 at 161.321 kb on + strand, within AZOBR_RS26790 at 161.321 kb on + strand, within AZOBR_RS26790 at 161.321 kb on + strand, within AZOBR_RS26790 at 161.321 kb on + strand, within AZOBR_RS26790 at 161.322 kb on - strand, within AZOBR_RS26790 at 161.322 kb on - strand, within AZOBR_RS26790 at 161.322 kb on - strand, within AZOBR_RS26790 at 161.322 kb on - strand, within AZOBR_RS26790 at 161.322 kb on - strand, within AZOBR_RS26790 at 161.322 kb on - strand, within AZOBR_RS26790 at 161.626 kb on + strand at 161.626 kb on + strand at 161.626 kb on + strand at 161.626 kb on + strand at 161.626 kb on + strand at 161.626 kb on + strand at 161.626 kb on + strand at 161.627 kb on - strand at 161.627 kb on - strand at 161.627 kb on - strand at 161.627 kb on - strand at 161.627 kb on - strand at 161.705 kb on - strand, within AZOBR_RS26795 at 161.710 kb on + strand, within AZOBR_RS26795 at 161.764 kb on + strand, within AZOBR_RS26795 at 161.764 kb on + strand, within AZOBR_RS26795 at 161.765 kb on - strand, within AZOBR_RS26795 at 161.777 kb on + strand, within AZOBR_RS26795 at 161.778 kb on - strand, within AZOBR_RS26795 at 161.798 kb on - strand, within AZOBR_RS26795 at 162.340 kb on - strand, within AZOBR_RS26800 at 162.496 kb on - strand, within AZOBR_RS26800 at 162.741 kb on + strand, within AZOBR_RS26800 at 162.742 kb on - strand, within AZOBR_RS26800 at 162.742 kb on - strand, within AZOBR_RS26800 at 162.802 kb on - strand at 162.802 kb on - strand at 163.355 kb on + strand at 163.355 kb on + strand at 163.544 kb on + strand, within AZOBR_RS26805 at 163.545 kb on - strand, within AZOBR_RS26805 at 163.683 kb on - strand, within AZOBR_RS26805 at 163.791 kb on - strand, within AZOBR_RS26805
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 6.3476 mM remove 161,321 + AZOBR_RS26790 0.87 +0.7 161,321 + AZOBR_RS26790 0.87 -3.1 161,321 + AZOBR_RS26790 0.87 -0.4 161,321 + AZOBR_RS26790 0.87 +0.5 161,321 + AZOBR_RS26790 0.87 -0.3 161,321 + AZOBR_RS26790 0.87 -2.7 161,322 - AZOBR_RS26790 0.87 +0.5 161,322 - AZOBR_RS26790 0.87 -2.6 161,322 - AZOBR_RS26790 0.87 -1.1 161,322 - AZOBR_RS26790 0.87 -1.1 161,322 - AZOBR_RS26790 0.87 +0.9 161,322 - AZOBR_RS26790 0.87 +0.2 161,626 + +0.4 161,626 + -1.3 161,626 + -0.1 161,626 + +0.9 161,626 + -1.3 161,626 + +0.3 161,626 + -0.1 161,627 - +0.1 161,627 - -0.3 161,627 - -1.6 161,627 - +0.7 161,627 - -1.7 161,705 - AZOBR_RS26795 0.15 +0.5 161,710 + AZOBR_RS26795 0.16 +0.7 161,764 + AZOBR_RS26795 0.25 +2.5 161,764 + AZOBR_RS26795 0.25 +1.9 161,765 - AZOBR_RS26795 0.25 +0.6 161,777 + AZOBR_RS26795 0.27 -0.5 161,778 - AZOBR_RS26795 0.27 +0.5 161,798 - AZOBR_RS26795 0.30 +0.5 162,340 - AZOBR_RS26800 0.19 -0.6 162,496 - AZOBR_RS26800 0.46 -1.5 162,741 + AZOBR_RS26800 0.89 +1.9 162,742 - AZOBR_RS26800 0.89 -0.7 162,742 - AZOBR_RS26800 0.89 -0.8 162,802 - -1.3 162,802 - -0.3 163,355 + +0.3 163,355 + -1.6 163,544 + AZOBR_RS26805 0.20 -1.3 163,545 - AZOBR_RS26805 0.20 +0.0 163,683 - AZOBR_RS26805 0.29 -0.8 163,791 - AZOBR_RS26805 0.36 -1.1
Or see this region's nucleotide sequence