Experiment: 3-octanone 6.3476 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS23860 and AZOBR_RS23865 are separated by 78 nucleotides AZOBR_RS23865 and AZOBR_RS23870 are separated by 249 nucleotides AZOBR_RS23870 and AZOBR_RS23875 are separated by 105 nucleotides
AZOBR_RS23860: AZOBR_RS23860 - ABC transporter, at 384,479 to 385,519
_RS23860
AZOBR_RS23865: AZOBR_RS23865 - hypothetical protein, at 385,598 to 386,206
_RS23865
AZOBR_RS23870: AZOBR_RS23870 - hypothetical protein, at 386,456 to 386,650
_RS23870
AZOBR_RS23875: AZOBR_RS23875 - hypothetical protein, at 386,756 to 388,597
_RS23875
Position (kb) 385
386
387 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 385.369 kb on - strand, within AZOBR_RS23860 at 385.369 kb on - strand, within AZOBR_RS23860 at 385.369 kb on - strand, within AZOBR_RS23860 at 385.369 kb on - strand, within AZOBR_RS23860 at 385.671 kb on + strand, within AZOBR_RS23865 at 385.672 kb on - strand, within AZOBR_RS23865 at 385.672 kb on - strand, within AZOBR_RS23865 at 385.672 kb on - strand, within AZOBR_RS23865 at 385.672 kb on - strand, within AZOBR_RS23865 at 385.672 kb on - strand, within AZOBR_RS23865 at 385.776 kb on + strand, within AZOBR_RS23865 at 385.776 kb on + strand, within AZOBR_RS23865 at 385.776 kb on + strand, within AZOBR_RS23865 at 385.776 kb on + strand, within AZOBR_RS23865 at 385.776 kb on + strand, within AZOBR_RS23865 at 385.777 kb on - strand, within AZOBR_RS23865 at 385.777 kb on - strand, within AZOBR_RS23865 at 385.956 kb on + strand, within AZOBR_RS23865 at 385.957 kb on - strand, within AZOBR_RS23865 at 385.957 kb on - strand, within AZOBR_RS23865 at 386.223 kb on + strand at 386.223 kb on + strand at 386.272 kb on + strand at 386.272 kb on + strand at 386.273 kb on - strand at 386.273 kb on - strand at 386.273 kb on - strand at 386.273 kb on - strand at 386.562 kb on - strand, within AZOBR_RS23870 at 386.564 kb on - strand, within AZOBR_RS23870 at 386.953 kb on - strand, within AZOBR_RS23875 at 387.099 kb on + strand, within AZOBR_RS23875 at 387.100 kb on - strand, within AZOBR_RS23875 at 387.100 kb on - strand, within AZOBR_RS23875 at 387.196 kb on + strand, within AZOBR_RS23875 at 387.196 kb on + strand, within AZOBR_RS23875
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 6.3476 mM remove 385,369 - AZOBR_RS23860 0.85 -1.2 385,369 - AZOBR_RS23860 0.85 -2.2 385,369 - AZOBR_RS23860 0.85 +0.6 385,369 - AZOBR_RS23860 0.85 -1.3 385,671 + AZOBR_RS23865 0.12 -0.4 385,672 - AZOBR_RS23865 0.12 -3.0 385,672 - AZOBR_RS23865 0.12 -1.1 385,672 - AZOBR_RS23865 0.12 -0.5 385,672 - AZOBR_RS23865 0.12 -2.1 385,672 - AZOBR_RS23865 0.12 +0.2 385,776 + AZOBR_RS23865 0.29 -0.4 385,776 + AZOBR_RS23865 0.29 +0.2 385,776 + AZOBR_RS23865 0.29 +1.5 385,776 + AZOBR_RS23865 0.29 -2.7 385,776 + AZOBR_RS23865 0.29 +2.7 385,777 - AZOBR_RS23865 0.29 +1.0 385,777 - AZOBR_RS23865 0.29 -0.3 385,956 + AZOBR_RS23865 0.59 +1.7 385,957 - AZOBR_RS23865 0.59 -0.3 385,957 - AZOBR_RS23865 0.59 +2.4 386,223 + -0.9 386,223 + +0.0 386,272 + +1.8 386,272 + +0.4 386,273 - +0.5 386,273 - +0.4 386,273 - +0.1 386,273 - -0.2 386,562 - AZOBR_RS23870 0.54 +0.1 386,564 - AZOBR_RS23870 0.55 -0.7 386,953 - AZOBR_RS23875 0.11 +0.2 387,099 + AZOBR_RS23875 0.19 -0.3 387,100 - AZOBR_RS23875 0.19 -0.8 387,100 - AZOBR_RS23875 0.19 -0.7 387,196 + AZOBR_RS23875 0.24 -0.3 387,196 + AZOBR_RS23875 0.24 -0.9
Or see this region's nucleotide sequence