Experiment: 3-octanone 6.3476 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS21910 and AZOBR_RS21915 are separated by 31 nucleotides AZOBR_RS21915 and AZOBR_RS21920 are separated by 127 nucleotides AZOBR_RS21920 and AZOBR_RS21925 are separated by 67 nucleotides
AZOBR_RS21910: AZOBR_RS21910 - methyltransferase, at 1,689,600 to 1,690,979
_RS21910
AZOBR_RS21915: AZOBR_RS21915 - LysR family transcriptional regulator, at 1,691,011 to 1,691,949
_RS21915
AZOBR_RS21920: AZOBR_RS21920 - NAD(P)H quinone oxidoreductase, at 1,692,077 to 1,692,679
_RS21920
AZOBR_RS21925: AZOBR_RS21925 - glutathione S-transferase, at 1,692,747 to 1,693,694
_RS21925
Position (kb)
1691
1692 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1690.347 kb on + strand, within AZOBR_RS21910 at 1690.348 kb on - strand, within AZOBR_RS21910 at 1690.348 kb on - strand, within AZOBR_RS21910 at 1690.372 kb on - strand at 1690.611 kb on + strand, within AZOBR_RS21910 at 1690.612 kb on - strand, within AZOBR_RS21910 at 1690.612 kb on - strand, within AZOBR_RS21910 at 1690.668 kb on + strand, within AZOBR_RS21910 at 1690.669 kb on - strand, within AZOBR_RS21910 at 1690.854 kb on + strand at 1690.855 kb on - strand at 1690.955 kb on + strand at 1690.955 kb on + strand at 1690.956 kb on - strand at 1690.956 kb on - strand at 1690.958 kb on - strand at 1691.168 kb on + strand, within AZOBR_RS21915 at 1691.168 kb on + strand, within AZOBR_RS21915 at 1691.168 kb on + strand, within AZOBR_RS21915 at 1691.168 kb on + strand, within AZOBR_RS21915 at 1691.169 kb on - strand, within AZOBR_RS21915 at 1691.169 kb on - strand, within AZOBR_RS21915 at 1691.169 kb on - strand, within AZOBR_RS21915 at 1691.169 kb on - strand, within AZOBR_RS21915 at 1691.169 kb on - strand, within AZOBR_RS21915 at 1691.169 kb on - strand, within AZOBR_RS21915 at 1691.171 kb on + strand, within AZOBR_RS21915 at 1691.171 kb on + strand, within AZOBR_RS21915 at 1691.534 kb on + strand, within AZOBR_RS21915 at 1691.558 kb on + strand, within AZOBR_RS21915 at 1691.559 kb on - strand, within AZOBR_RS21915 at 1691.753 kb on + strand, within AZOBR_RS21915 at 1691.753 kb on + strand, within AZOBR_RS21915 at 1691.754 kb on - strand, within AZOBR_RS21915 at 1691.757 kb on - strand, within AZOBR_RS21915 at 1691.920 kb on - strand at 1692.098 kb on + strand at 1692.098 kb on + strand at 1692.098 kb on + strand at 1692.099 kb on - strand at 1692.102 kb on - strand at 1692.284 kb on + strand, within AZOBR_RS21920 at 1692.285 kb on - strand, within AZOBR_RS21920
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 6.3476 mM remove 1,690,347 + AZOBR_RS21910 0.54 -0.3 1,690,348 - AZOBR_RS21910 0.54 +1.3 1,690,348 - AZOBR_RS21910 0.54 -0.1 1,690,372 - -0.8 1,690,611 + AZOBR_RS21910 0.73 -0.1 1,690,612 - AZOBR_RS21910 0.73 +0.5 1,690,612 - AZOBR_RS21910 0.73 +0.1 1,690,668 + AZOBR_RS21910 0.77 -1.0 1,690,669 - AZOBR_RS21910 0.77 -0.3 1,690,854 + -0.9 1,690,855 - +0.4 1,690,955 + -3.0 1,690,955 + +0.4 1,690,956 - -0.3 1,690,956 - -1.1 1,690,958 - -2.0 1,691,168 + AZOBR_RS21915 0.17 -1.5 1,691,168 + AZOBR_RS21915 0.17 -0.9 1,691,168 + AZOBR_RS21915 0.17 +0.4 1,691,168 + AZOBR_RS21915 0.17 +2.4 1,691,169 - AZOBR_RS21915 0.17 +0.0 1,691,169 - AZOBR_RS21915 0.17 -2.0 1,691,169 - AZOBR_RS21915 0.17 -1.6 1,691,169 - AZOBR_RS21915 0.17 -2.4 1,691,169 - AZOBR_RS21915 0.17 -0.6 1,691,169 - AZOBR_RS21915 0.17 -0.8 1,691,171 + AZOBR_RS21915 0.17 -1.5 1,691,171 + AZOBR_RS21915 0.17 +0.4 1,691,534 + AZOBR_RS21915 0.56 -2.2 1,691,558 + AZOBR_RS21915 0.58 -2.7 1,691,559 - AZOBR_RS21915 0.58 -0.8 1,691,753 + AZOBR_RS21915 0.79 -2.1 1,691,753 + AZOBR_RS21915 0.79 -0.9 1,691,754 - AZOBR_RS21915 0.79 -2.2 1,691,757 - AZOBR_RS21915 0.79 +1.1 1,691,920 - +1.4 1,692,098 + -0.6 1,692,098 + -0.6 1,692,098 + -1.6 1,692,099 - -0.2 1,692,102 - +1.7 1,692,284 + AZOBR_RS21920 0.34 +0.8 1,692,285 - AZOBR_RS21920 0.34 -2.6
Or see this region's nucleotide sequence