Experiment: 3-octanone 6.3476 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS21695 and AZOBR_RS21700 are separated by 190 nucleotides AZOBR_RS21700 and AZOBR_RS21705 overlap by 4 nucleotides AZOBR_RS21705 and AZOBR_RS21710 overlap by 4 nucleotides AZOBR_RS21710 and AZOBR_RS21715 are separated by 8 nucleotides
AZOBR_RS21695: AZOBR_RS21695 - hypothetical protein, at 1,645,204 to 1,645,683
_RS21695
AZOBR_RS21700: AZOBR_RS21700 - hypothetical protein, at 1,645,874 to 1,646,392
_RS21700
AZOBR_RS21705: AZOBR_RS21705 - 2-aminobenzoate-CoA ligase, at 1,646,389 to 1,648,026
_RS21705
AZOBR_RS21710: AZOBR_RS21710 - conserved membrane protein of unknown function, at 1,648,023 to 1,648,436
_RS21710
AZOBR_RS21715: AZOBR_RS21715 - hypothetical protein, at 1,648,445 to 1,649,116
_RS21715
Position (kb)
1646
1647
1648
1649 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1645.666 kb on + strand at 1645.788 kb on + strand at 1645.789 kb on - strand at 1645.789 kb on - strand at 1645.794 kb on - strand at 1645.794 kb on - strand at 1645.794 kb on - strand at 1645.794 kb on - strand at 1646.157 kb on + strand, within AZOBR_RS21700 at 1646.158 kb on - strand, within AZOBR_RS21700 at 1646.158 kb on - strand, within AZOBR_RS21700 at 1646.158 kb on - strand, within AZOBR_RS21700 at 1646.158 kb on - strand, within AZOBR_RS21700 at 1646.158 kb on - strand, within AZOBR_RS21700 at 1646.158 kb on - strand, within AZOBR_RS21700 at 1646.587 kb on + strand, within AZOBR_RS21705 at 1647.616 kb on + strand, within AZOBR_RS21705 at 1647.616 kb on + strand, within AZOBR_RS21705 at 1647.617 kb on - strand, within AZOBR_RS21705 at 1647.892 kb on + strand at 1648.197 kb on + strand, within AZOBR_RS21710 at 1648.198 kb on - strand, within AZOBR_RS21710 at 1648.198 kb on - strand, within AZOBR_RS21710 at 1648.198 kb on - strand, within AZOBR_RS21710 at 1648.338 kb on + strand, within AZOBR_RS21710 at 1648.438 kb on + strand at 1648.551 kb on + strand, within AZOBR_RS21715 at 1648.551 kb on + strand, within AZOBR_RS21715 at 1648.552 kb on - strand, within AZOBR_RS21715 at 1648.788 kb on + strand, within AZOBR_RS21715 at 1648.788 kb on + strand, within AZOBR_RS21715 at 1648.788 kb on + strand, within AZOBR_RS21715 at 1648.789 kb on - strand, within AZOBR_RS21715 at 1648.789 kb on - strand, within AZOBR_RS21715 at 1648.789 kb on - strand, within AZOBR_RS21715 at 1648.929 kb on + strand, within AZOBR_RS21715
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 6.3476 mM remove 1,645,666 + +0.2 1,645,788 + -0.3 1,645,789 - +0.4 1,645,789 - -1.4 1,645,794 - -1.2 1,645,794 - -0.1 1,645,794 - -0.4 1,645,794 - +0.8 1,646,157 + AZOBR_RS21700 0.55 -0.9 1,646,158 - AZOBR_RS21700 0.55 +2.4 1,646,158 - AZOBR_RS21700 0.55 -1.3 1,646,158 - AZOBR_RS21700 0.55 +0.1 1,646,158 - AZOBR_RS21700 0.55 +0.1 1,646,158 - AZOBR_RS21700 0.55 -0.1 1,646,158 - AZOBR_RS21700 0.55 -0.6 1,646,587 + AZOBR_RS21705 0.12 +0.8 1,647,616 + AZOBR_RS21705 0.75 +0.8 1,647,616 + AZOBR_RS21705 0.75 +0.1 1,647,617 - AZOBR_RS21705 0.75 +1.4 1,647,892 + +2.3 1,648,197 + AZOBR_RS21710 0.42 +0.3 1,648,198 - AZOBR_RS21710 0.42 -0.4 1,648,198 - AZOBR_RS21710 0.42 -1.4 1,648,198 - AZOBR_RS21710 0.42 -1.6 1,648,338 + AZOBR_RS21710 0.76 -0.8 1,648,438 + -0.9 1,648,551 + AZOBR_RS21715 0.16 -2.0 1,648,551 + AZOBR_RS21715 0.16 -2.4 1,648,552 - AZOBR_RS21715 0.16 +0.7 1,648,788 + AZOBR_RS21715 0.51 +1.2 1,648,788 + AZOBR_RS21715 0.51 +3.2 1,648,788 + AZOBR_RS21715 0.51 -1.2 1,648,789 - AZOBR_RS21715 0.51 +0.5 1,648,789 - AZOBR_RS21715 0.51 -3.2 1,648,789 - AZOBR_RS21715 0.51 +0.5 1,648,929 + AZOBR_RS21715 0.72 +0.8
Or see this region's nucleotide sequence