Experiment: 3-octanone 6.3476 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS21135 and AZOBR_RS21140 are separated by 292 nucleotides AZOBR_RS21140 and AZOBR_RS21145 are separated by 164 nucleotides
AZOBR_RS21135: AZOBR_RS21135 - histidine kinase, at 1,521,558 to 1,523,324
_RS21135
AZOBR_RS21140: AZOBR_RS21140 - C4-dicarboxylate ABC transporter, at 1,523,617 to 1,524,918
_RS21140
AZOBR_RS21145: AZOBR_RS21145 - NADP-dependent malic enzyme, at 1,525,083 to 1,527,401
_RS21145
Position (kb)
1523
1524
1525 Strain fitness (log2 ratio)
-1
0
1
2
3 at 1522.843 kb on + strand, within AZOBR_RS21135 at 1522.846 kb on + strand, within AZOBR_RS21135 at 1522.847 kb on - strand, within AZOBR_RS21135 at 1522.919 kb on - strand, within AZOBR_RS21135 at 1523.008 kb on + strand, within AZOBR_RS21135 at 1523.008 kb on + strand, within AZOBR_RS21135 at 1523.009 kb on - strand, within AZOBR_RS21135 at 1523.009 kb on - strand, within AZOBR_RS21135 at 1523.653 kb on + strand at 1523.654 kb on - strand at 1523.875 kb on + strand, within AZOBR_RS21140 at 1523.875 kb on + strand, within AZOBR_RS21140 at 1523.875 kb on + strand, within AZOBR_RS21140 at 1523.904 kb on - strand, within AZOBR_RS21140 at 1523.904 kb on - strand, within AZOBR_RS21140 at 1523.995 kb on + strand, within AZOBR_RS21140 at 1523.995 kb on + strand, within AZOBR_RS21140 at 1523.995 kb on + strand, within AZOBR_RS21140 at 1524.269 kb on - strand, within AZOBR_RS21140 at 1524.316 kb on + strand, within AZOBR_RS21140 at 1524.316 kb on + strand, within AZOBR_RS21140 at 1524.370 kb on + strand, within AZOBR_RS21140 at 1524.370 kb on + strand, within AZOBR_RS21140 at 1524.371 kb on - strand, within AZOBR_RS21140 at 1524.560 kb on - strand, within AZOBR_RS21140 at 1524.877 kb on + strand at 1525.014 kb on + strand at 1525.082 kb on + strand at 1525.082 kb on + strand at 1525.082 kb on + strand at 1525.083 kb on - strand at 1525.083 kb on - strand at 1525.116 kb on + strand at 1525.117 kb on - strand at 1525.789 kb on - strand, within AZOBR_RS21145 at 1525.789 kb on - strand, within AZOBR_RS21145 at 1525.789 kb on - strand, within AZOBR_RS21145
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 6.3476 mM remove 1,522,843 + AZOBR_RS21135 0.73 +0.7 1,522,846 + AZOBR_RS21135 0.73 -0.3 1,522,847 - AZOBR_RS21135 0.73 -1.0 1,522,919 - AZOBR_RS21135 0.77 -0.1 1,523,008 + AZOBR_RS21135 0.82 -1.1 1,523,008 + AZOBR_RS21135 0.82 +0.2 1,523,009 - AZOBR_RS21135 0.82 +0.0 1,523,009 - AZOBR_RS21135 0.82 -0.8 1,523,653 + -0.4 1,523,654 - +1.4 1,523,875 + AZOBR_RS21140 0.20 +0.8 1,523,875 + AZOBR_RS21140 0.20 +1.1 1,523,875 + AZOBR_RS21140 0.20 +0.4 1,523,904 - AZOBR_RS21140 0.22 +3.7 1,523,904 - AZOBR_RS21140 0.22 +0.4 1,523,995 + AZOBR_RS21140 0.29 -0.4 1,523,995 + AZOBR_RS21140 0.29 +2.4 1,523,995 + AZOBR_RS21140 0.29 +0.8 1,524,269 - AZOBR_RS21140 0.50 +1.4 1,524,316 + AZOBR_RS21140 0.54 -1.2 1,524,316 + AZOBR_RS21140 0.54 -0.3 1,524,370 + AZOBR_RS21140 0.58 -0.6 1,524,370 + AZOBR_RS21140 0.58 -1.7 1,524,371 - AZOBR_RS21140 0.58 +1.4 1,524,560 - AZOBR_RS21140 0.72 +1.4 1,524,877 + -0.3 1,525,014 + +1.3 1,525,082 + -0.8 1,525,082 + -0.1 1,525,082 + -0.8 1,525,083 - +0.4 1,525,083 - -0.4 1,525,116 + -0.0 1,525,117 - +0.4 1,525,789 - AZOBR_RS21145 0.30 -0.8 1,525,789 - AZOBR_RS21145 0.30 +2.4 1,525,789 - AZOBR_RS21145 0.30 +1.4
Or see this region's nucleotide sequence