Experiment: 3-octanone 6.3476 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS17005 and AZOBR_RS17010 overlap by 60 nucleotides AZOBR_RS17010 and AZOBR_RS17015 are separated by 169 nucleotides AZOBR_RS17015 and AZOBR_RS17020 are separated by 9 nucleotides AZOBR_RS17020 and AZOBR_RS17025 are separated by 24 nucleotides
AZOBR_RS17005: AZOBR_RS17005 - radical SAM protein, at 570,770 to 571,897
_RS17005
AZOBR_RS17010: AZOBR_RS17010 - hypothetical protein, at 571,838 to 572,107
_RS17010
AZOBR_RS17015: AZOBR_RS17015 - hypothetical protein, at 572,277 to 572,663
_RS17015
AZOBR_RS17020: AZOBR_RS17020 - hypothetical protein, at 572,673 to 573,068
_RS17020
AZOBR_RS17025: AZOBR_RS17025 - squalene--hopene cyclase, at 573,093 to 575,024
_RS17025
Position (kb) 571
572
573 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 570.917 kb on + strand, within AZOBR_RS17005 at 571.079 kb on + strand, within AZOBR_RS17005 at 571.079 kb on + strand, within AZOBR_RS17005 at 571.211 kb on + strand, within AZOBR_RS17005 at 571.211 kb on + strand, within AZOBR_RS17005 at 571.370 kb on + strand, within AZOBR_RS17005 at 571.376 kb on + strand, within AZOBR_RS17005 at 571.523 kb on + strand, within AZOBR_RS17005 at 571.523 kb on + strand, within AZOBR_RS17005 at 571.524 kb on - strand, within AZOBR_RS17005 at 571.583 kb on + strand, within AZOBR_RS17005 at 571.584 kb on - strand, within AZOBR_RS17005 at 571.584 kb on - strand, within AZOBR_RS17005 at 571.649 kb on + strand, within AZOBR_RS17005 at 571.650 kb on - strand, within AZOBR_RS17005 at 571.664 kb on + strand, within AZOBR_RS17005 at 571.665 kb on - strand, within AZOBR_RS17005 at 571.665 kb on - strand, within AZOBR_RS17005 at 572.432 kb on - strand, within AZOBR_RS17015 at 572.857 kb on + strand, within AZOBR_RS17020 at 572.858 kb on - strand, within AZOBR_RS17020 at 572.873 kb on - strand, within AZOBR_RS17020 at 572.873 kb on - strand, within AZOBR_RS17020 at 572.873 kb on - strand, within AZOBR_RS17020
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 6.3476 mM remove 570,917 + AZOBR_RS17005 0.13 -1.2 571,079 + AZOBR_RS17005 0.27 -1.8 571,079 + AZOBR_RS17005 0.27 -1.2 571,211 + AZOBR_RS17005 0.39 -1.5 571,211 + AZOBR_RS17005 0.39 +0.5 571,370 + AZOBR_RS17005 0.53 -0.9 571,376 + AZOBR_RS17005 0.54 -2.4 571,523 + AZOBR_RS17005 0.67 +0.4 571,523 + AZOBR_RS17005 0.67 -0.2 571,524 - AZOBR_RS17005 0.67 +0.5 571,583 + AZOBR_RS17005 0.72 -0.7 571,584 - AZOBR_RS17005 0.72 -3.6 571,584 - AZOBR_RS17005 0.72 -2.8 571,649 + AZOBR_RS17005 0.78 -0.5 571,650 - AZOBR_RS17005 0.78 -0.0 571,664 + AZOBR_RS17005 0.79 -0.1 571,665 - AZOBR_RS17005 0.79 -1.7 571,665 - AZOBR_RS17005 0.79 -1.0 572,432 - AZOBR_RS17015 0.40 +0.6 572,857 + AZOBR_RS17020 0.46 +0.3 572,858 - AZOBR_RS17020 0.47 +0.3 572,873 - AZOBR_RS17020 0.51 +0.8 572,873 - AZOBR_RS17020 0.51 +1.7 572,873 - AZOBR_RS17020 0.51 +1.0
Or see this region's nucleotide sequence