Experiment: 3-octanone 6.3476 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS16495 and AZOBR_RS16500 are separated by 34 nucleotides AZOBR_RS16500 and AZOBR_RS16505 are separated by 290 nucleotides
AZOBR_RS16495: AZOBR_RS16495 - hypothetical protein, at 450,301 to 451,314
_RS16495
AZOBR_RS16500: AZOBR_RS16500 - C4-dicarboxylate ABC transporter permease, at 451,349 to 453,370
_RS16500
AZOBR_RS16505: AZOBR_RS16505 - hypothetical protein, at 453,661 to 454,647
_RS16505
Position (kb) 451
452
453
454 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 450.431 kb on + strand, within AZOBR_RS16495 at 450.432 kb on - strand, within AZOBR_RS16495 at 450.644 kb on + strand, within AZOBR_RS16495 at 450.645 kb on - strand, within AZOBR_RS16495 at 450.852 kb on - strand at 451.350 kb on + strand at 451.434 kb on + strand at 451.435 kb on - strand at 451.435 kb on - strand at 451.722 kb on + strand, within AZOBR_RS16500 at 451.767 kb on + strand, within AZOBR_RS16500 at 451.770 kb on + strand, within AZOBR_RS16500 at 451.770 kb on + strand, within AZOBR_RS16500 at 451.770 kb on - strand, within AZOBR_RS16500 at 451.851 kb on + strand, within AZOBR_RS16500 at 451.851 kb on + strand, within AZOBR_RS16500 at 451.851 kb on + strand, within AZOBR_RS16500 at 451.851 kb on + strand, within AZOBR_RS16500 at 451.851 kb on + strand, within AZOBR_RS16500 at 452.010 kb on + strand, within AZOBR_RS16500 at 452.011 kb on - strand, within AZOBR_RS16500 at 452.097 kb on + strand, within AZOBR_RS16500 at 452.098 kb on - strand, within AZOBR_RS16500 at 452.208 kb on + strand, within AZOBR_RS16500 at 452.208 kb on + strand, within AZOBR_RS16500 at 452.209 kb on - strand, within AZOBR_RS16500 at 452.209 kb on - strand, within AZOBR_RS16500 at 452.418 kb on + strand, within AZOBR_RS16500 at 452.419 kb on - strand, within AZOBR_RS16500 at 452.419 kb on - strand, within AZOBR_RS16500 at 452.419 kb on - strand, within AZOBR_RS16500 at 452.532 kb on + strand, within AZOBR_RS16500 at 452.533 kb on - strand, within AZOBR_RS16500 at 452.751 kb on + strand, within AZOBR_RS16500 at 452.751 kb on + strand, within AZOBR_RS16500 at 452.751 kb on + strand, within AZOBR_RS16500 at 452.752 kb on - strand, within AZOBR_RS16500 at 452.752 kb on - strand, within AZOBR_RS16500 at 452.752 kb on - strand, within AZOBR_RS16500 at 452.802 kb on + strand, within AZOBR_RS16500 at 452.802 kb on + strand, within AZOBR_RS16500 at 452.803 kb on - strand, within AZOBR_RS16500 at 452.803 kb on - strand, within AZOBR_RS16500 at 452.803 kb on - strand, within AZOBR_RS16500 at 452.803 kb on - strand, within AZOBR_RS16500 at 452.880 kb on + strand, within AZOBR_RS16500 at 452.880 kb on + strand, within AZOBR_RS16500 at 453.237 kb on + strand at 453.238 kb on - strand at 453.238 kb on - strand at 453.617 kb on - strand at 453.617 kb on - strand at 453.617 kb on - strand at 453.686 kb on + strand at 453.687 kb on - strand at 453.803 kb on + strand, within AZOBR_RS16505 at 453.824 kb on + strand, within AZOBR_RS16505 at 453.824 kb on + strand, within AZOBR_RS16505 at 453.825 kb on - strand, within AZOBR_RS16505 at 453.905 kb on + strand, within AZOBR_RS16505 at 453.905 kb on + strand, within AZOBR_RS16505 at 453.906 kb on - strand, within AZOBR_RS16505 at 453.906 kb on - strand, within AZOBR_RS16505 at 453.906 kb on - strand, within AZOBR_RS16505 at 454.055 kb on + strand, within AZOBR_RS16505 at 454.055 kb on + strand, within AZOBR_RS16505 at 454.056 kb on - strand, within AZOBR_RS16505 at 454.109 kb on + strand, within AZOBR_RS16505 at 454.109 kb on + strand, within AZOBR_RS16505
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 6.3476 mM remove 450,431 + AZOBR_RS16495 0.13 +1.3 450,432 - AZOBR_RS16495 0.13 -0.1 450,644 + AZOBR_RS16495 0.34 -1.6 450,645 - AZOBR_RS16495 0.34 -2.2 450,852 - -0.4 451,350 + +1.7 451,434 + +1.7 451,435 - -0.1 451,435 - -0.5 451,722 + AZOBR_RS16500 0.18 -1.6 451,767 + AZOBR_RS16500 0.21 +0.6 451,770 + AZOBR_RS16500 0.21 -0.4 451,770 + AZOBR_RS16500 0.21 -1.2 451,770 - AZOBR_RS16500 0.21 +0.2 451,851 + AZOBR_RS16500 0.25 -1.0 451,851 + AZOBR_RS16500 0.25 -1.4 451,851 + AZOBR_RS16500 0.25 -2.0 451,851 + AZOBR_RS16500 0.25 -0.5 451,851 + AZOBR_RS16500 0.25 +0.7 452,010 + AZOBR_RS16500 0.33 +0.7 452,011 - AZOBR_RS16500 0.33 +0.4 452,097 + AZOBR_RS16500 0.37 +1.4 452,098 - AZOBR_RS16500 0.37 -0.7 452,208 + AZOBR_RS16500 0.42 -1.3 452,208 + AZOBR_RS16500 0.42 +0.7 452,209 - AZOBR_RS16500 0.43 +0.6 452,209 - AZOBR_RS16500 0.43 +0.3 452,418 + AZOBR_RS16500 0.53 -0.1 452,419 - AZOBR_RS16500 0.53 -1.4 452,419 - AZOBR_RS16500 0.53 +0.2 452,419 - AZOBR_RS16500 0.53 +2.6 452,532 + AZOBR_RS16500 0.59 -2.8 452,533 - AZOBR_RS16500 0.59 +0.4 452,751 + AZOBR_RS16500 0.69 -1.5 452,751 + AZOBR_RS16500 0.69 +0.8 452,751 + AZOBR_RS16500 0.69 +0.1 452,752 - AZOBR_RS16500 0.69 -1.7 452,752 - AZOBR_RS16500 0.69 +0.6 452,752 - AZOBR_RS16500 0.69 +0.2 452,802 + AZOBR_RS16500 0.72 +1.1 452,802 + AZOBR_RS16500 0.72 +0.2 452,803 - AZOBR_RS16500 0.72 +1.3 452,803 - AZOBR_RS16500 0.72 -0.1 452,803 - AZOBR_RS16500 0.72 -3.1 452,803 - AZOBR_RS16500 0.72 -0.7 452,880 + AZOBR_RS16500 0.76 +0.4 452,880 + AZOBR_RS16500 0.76 +1.4 453,237 + -0.1 453,238 - +0.8 453,238 - -1.7 453,617 - -1.5 453,617 - +0.2 453,617 - -0.5 453,686 + +0.1 453,687 - -0.9 453,803 + AZOBR_RS16505 0.14 -1.1 453,824 + AZOBR_RS16505 0.17 -1.6 453,824 + AZOBR_RS16505 0.17 -2.9 453,825 - AZOBR_RS16505 0.17 +0.1 453,905 + AZOBR_RS16505 0.25 -2.5 453,905 + AZOBR_RS16505 0.25 -0.8 453,906 - AZOBR_RS16505 0.25 -1.4 453,906 - AZOBR_RS16505 0.25 -3.0 453,906 - AZOBR_RS16505 0.25 -0.9 454,055 + AZOBR_RS16505 0.40 -0.5 454,055 + AZOBR_RS16505 0.40 +1.4 454,056 - AZOBR_RS16505 0.40 -0.6 454,109 + AZOBR_RS16505 0.45 -0.6 454,109 + AZOBR_RS16505 0.45 -1.0
Or see this region's nucleotide sequence