Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS08740

Experiment: 3-octanone 6.3476 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAZOBR_RS08730 and AZOBR_RS08735 are separated by 217 nucleotidesAZOBR_RS08735 and AZOBR_RS08740 are separated by 110 nucleotides AZOBR_RS08730: AZOBR_RS08730 - tRNA-Cys, at 1,825,811 to 1,825,884 _RS08730 AZOBR_RS08735: AZOBR_RS08735 - protein-L-isoaspartate O-methyltransferase, at 1,826,102 to 1,826,758 _RS08735 AZOBR_RS08740: AZOBR_RS08740 - thiosulfate sulfurtransferase, at 1,826,869 to 1,827,195 _RS08740 Position (kb) 1826 1827 1828Strain fitness (log2 ratio) -2 -1 0 1at 1826.024 kb on + strandat 1826.026 kb on + strandat 1826.026 kb on + strandat 1826.028 kb on + strandat 1826.751 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 3-octanone 6.3476 mM
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1,826,024 + -1.8
1,826,026 + +1.2
1,826,026 + -1.3
1,826,028 + -0.3
1,826,751 + -1.1

Or see this region's nucleotide sequence