Experiment: 3-octanone 6.3476 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS07645 and AZOBR_RS07650 are separated by 126 nucleotides AZOBR_RS07650 and AZOBR_RS07655 are separated by 6 nucleotides AZOBR_RS07655 and AZOBR_RS07660 are separated by 281 nucleotides
AZOBR_RS07645: AZOBR_RS07645 - diaminopropionate ammonia-lyase, at 1,608,388 to 1,609,620
_RS07645
AZOBR_RS07650: AZOBR_RS07650 - aspartate aminotransferase, at 1,609,747 to 1,610,928
_RS07650
AZOBR_RS07655: AZOBR_RS07655 - hypothetical protein, at 1,610,935 to 1,611,600
_RS07655
AZOBR_RS07660: AZOBR_RS07660 - hypothetical protein, at 1,611,882 to 1,612,607
_RS07660
Position (kb) 1609
1610
1611 Strain fitness (log2 ratio) -2
-1
0
1
2 at 1608.850 kb on + strand, within AZOBR_RS07645 at 1608.850 kb on + strand, within AZOBR_RS07645 at 1608.851 kb on - strand, within AZOBR_RS07645 at 1608.851 kb on - strand, within AZOBR_RS07645 at 1608.851 kb on - strand, within AZOBR_RS07645 at 1608.931 kb on + strand, within AZOBR_RS07645 at 1609.003 kb on + strand, within AZOBR_RS07645 at 1609.012 kb on + strand, within AZOBR_RS07645 at 1609.045 kb on + strand, within AZOBR_RS07645 at 1609.046 kb on - strand, within AZOBR_RS07645 at 1609.046 kb on - strand, within AZOBR_RS07645 at 1609.046 kb on - strand, within AZOBR_RS07645 at 1609.570 kb on + strand at 1609.570 kb on + strand at 1609.570 kb on + strand at 1609.571 kb on - strand at 1609.571 kb on - strand at 1609.948 kb on + strand, within AZOBR_RS07650 at 1610.011 kb on + strand, within AZOBR_RS07650 at 1610.131 kb on + strand, within AZOBR_RS07650 at 1610.132 kb on - strand, within AZOBR_RS07650 at 1610.132 kb on - strand, within AZOBR_RS07650 at 1610.326 kb on + strand, within AZOBR_RS07650 at 1610.327 kb on - strand, within AZOBR_RS07650 at 1610.327 kb on - strand, within AZOBR_RS07650 at 1610.327 kb on - strand, within AZOBR_RS07650 at 1610.327 kb on - strand, within AZOBR_RS07650 at 1610.327 kb on - strand, within AZOBR_RS07650 at 1610.374 kb on + strand, within AZOBR_RS07650 at 1610.458 kb on + strand, within AZOBR_RS07650 at 1610.476 kb on + strand, within AZOBR_RS07650 at 1610.477 kb on - strand, within AZOBR_RS07650 at 1610.477 kb on - strand, within AZOBR_RS07650 at 1610.726 kb on - strand, within AZOBR_RS07650 at 1610.734 kb on + strand, within AZOBR_RS07650 at 1610.735 kb on - strand, within AZOBR_RS07650 at 1610.848 kb on + strand at 1610.848 kb on + strand at 1610.849 kb on - strand at 1610.849 kb on - strand at 1611.170 kb on + strand, within AZOBR_RS07655 at 1611.170 kb on + strand, within AZOBR_RS07655 at 1611.191 kb on + strand, within AZOBR_RS07655 at 1611.192 kb on - strand, within AZOBR_RS07655 at 1611.192 kb on - strand, within AZOBR_RS07655
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 6.3476 mM remove 1,608,850 + AZOBR_RS07645 0.37 -0.8 1,608,850 + AZOBR_RS07645 0.37 -0.1 1,608,851 - AZOBR_RS07645 0.38 -1.1 1,608,851 - AZOBR_RS07645 0.38 -0.9 1,608,851 - AZOBR_RS07645 0.38 +0.3 1,608,931 + AZOBR_RS07645 0.44 +0.3 1,609,003 + AZOBR_RS07645 0.50 -0.3 1,609,012 + AZOBR_RS07645 0.51 -0.9 1,609,045 + AZOBR_RS07645 0.53 -2.3 1,609,046 - AZOBR_RS07645 0.53 -0.2 1,609,046 - AZOBR_RS07645 0.53 +1.3 1,609,046 - AZOBR_RS07645 0.53 -0.9 1,609,570 + +0.7 1,609,570 + -0.2 1,609,570 + +2.2 1,609,571 - -1.6 1,609,571 - +0.5 1,609,948 + AZOBR_RS07650 0.17 -0.9 1,610,011 + AZOBR_RS07650 0.22 +0.4 1,610,131 + AZOBR_RS07650 0.32 +0.5 1,610,132 - AZOBR_RS07650 0.33 -0.4 1,610,132 - AZOBR_RS07650 0.33 +0.5 1,610,326 + AZOBR_RS07650 0.49 +1.9 1,610,327 - AZOBR_RS07650 0.49 -0.8 1,610,327 - AZOBR_RS07650 0.49 +0.6 1,610,327 - AZOBR_RS07650 0.49 +0.7 1,610,327 - AZOBR_RS07650 0.49 -0.3 1,610,327 - AZOBR_RS07650 0.49 +0.4 1,610,374 + AZOBR_RS07650 0.53 -1.3 1,610,458 + AZOBR_RS07650 0.60 +0.2 1,610,476 + AZOBR_RS07650 0.62 +2.1 1,610,477 - AZOBR_RS07650 0.62 +0.7 1,610,477 - AZOBR_RS07650 0.62 -1.0 1,610,726 - AZOBR_RS07650 0.83 -0.8 1,610,734 + AZOBR_RS07650 0.84 +0.4 1,610,735 - AZOBR_RS07650 0.84 +0.8 1,610,848 + -0.4 1,610,848 + +1.0 1,610,849 - +0.5 1,610,849 - -1.1 1,611,170 + AZOBR_RS07655 0.35 +0.7 1,611,170 + AZOBR_RS07655 0.35 -0.9 1,611,191 + AZOBR_RS07655 0.38 +0.6 1,611,192 - AZOBR_RS07655 0.39 -1.2 1,611,192 - AZOBR_RS07655 0.39 +1.6
Or see this region's nucleotide sequence