Experiment: 3-octanone 6.3476 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS06705 and AZOBR_RS06710 are separated by 209 nucleotides AZOBR_RS06710 and AZOBR_RS06715 are separated by 244 nucleotides
AZOBR_RS06705: AZOBR_RS06705 - polyphosphate kinase, at 1,422,781 to 1,423,650
_RS06705
AZOBR_RS06710: AZOBR_RS06710 - hypothetical protein, at 1,423,860 to 1,424,687
_RS06710
AZOBR_RS06715: AZOBR_RS06715 - alpha-amylase, at 1,424,932 to 1,428,279
_RS06715
Position (kb) 1423
1424
1425 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 1422.959 kb on + strand, within AZOBR_RS06705 at 1422.960 kb on - strand, within AZOBR_RS06705 at 1423.017 kb on - strand, within AZOBR_RS06705 at 1423.017 kb on - strand, within AZOBR_RS06705 at 1423.136 kb on + strand, within AZOBR_RS06705 at 1423.137 kb on - strand, within AZOBR_RS06705 at 1423.208 kb on + strand, within AZOBR_RS06705 at 1423.260 kb on - strand, within AZOBR_RS06705 at 1423.260 kb on - strand, within AZOBR_RS06705 at 1423.313 kb on + strand, within AZOBR_RS06705 at 1423.325 kb on + strand, within AZOBR_RS06705 at 1423.326 kb on - strand, within AZOBR_RS06705 at 1423.326 kb on - strand, within AZOBR_RS06705 at 1423.326 kb on - strand, within AZOBR_RS06705 at 1423.535 kb on + strand, within AZOBR_RS06705 at 1423.535 kb on + strand, within AZOBR_RS06705 at 1423.535 kb on + strand, within AZOBR_RS06705 at 1423.535 kb on + strand, within AZOBR_RS06705 at 1423.536 kb on - strand, within AZOBR_RS06705 at 1423.759 kb on + strand at 1423.785 kb on - strand at 1424.092 kb on + strand, within AZOBR_RS06710 at 1424.092 kb on + strand, within AZOBR_RS06710 at 1424.093 kb on - strand, within AZOBR_RS06710 at 1424.150 kb on - strand, within AZOBR_RS06710 at 1424.150 kb on - strand, within AZOBR_RS06710 at 1424.273 kb on - strand, within AZOBR_RS06710 at 1424.396 kb on - strand, within AZOBR_RS06710 at 1424.401 kb on + strand, within AZOBR_RS06710 at 1424.401 kb on + strand, within AZOBR_RS06710 at 1424.401 kb on + strand, within AZOBR_RS06710 at 1424.402 kb on - strand, within AZOBR_RS06710 at 1424.402 kb on - strand, within AZOBR_RS06710 at 1424.402 kb on - strand, within AZOBR_RS06710 at 1424.557 kb on + strand, within AZOBR_RS06710 at 1424.557 kb on + strand, within AZOBR_RS06710 at 1424.646 kb on - strand at 1424.956 kb on + strand at 1424.956 kb on + strand at 1424.957 kb on - strand at 1425.086 kb on - strand at 1425.101 kb on - strand at 1425.101 kb on - strand at 1425.296 kb on - strand, within AZOBR_RS06715 at 1425.296 kb on - strand, within AZOBR_RS06715 at 1425.368 kb on - strand, within AZOBR_RS06715 at 1425.368 kb on - strand, within AZOBR_RS06715 at 1425.427 kb on + strand, within AZOBR_RS06715 at 1425.427 kb on + strand, within AZOBR_RS06715 at 1425.428 kb on - strand, within AZOBR_RS06715
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 6.3476 mM remove 1,422,959 + AZOBR_RS06705 0.20 -1.0 1,422,960 - AZOBR_RS06705 0.21 +0.6 1,423,017 - AZOBR_RS06705 0.27 +1.5 1,423,017 - AZOBR_RS06705 0.27 +0.3 1,423,136 + AZOBR_RS06705 0.41 +0.1 1,423,137 - AZOBR_RS06705 0.41 -0.1 1,423,208 + AZOBR_RS06705 0.49 -0.6 1,423,260 - AZOBR_RS06705 0.55 +0.2 1,423,260 - AZOBR_RS06705 0.55 +0.1 1,423,313 + AZOBR_RS06705 0.61 -1.1 1,423,325 + AZOBR_RS06705 0.63 +0.4 1,423,326 - AZOBR_RS06705 0.63 +1.7 1,423,326 - AZOBR_RS06705 0.63 +0.3 1,423,326 - AZOBR_RS06705 0.63 -1.9 1,423,535 + AZOBR_RS06705 0.87 -0.6 1,423,535 + AZOBR_RS06705 0.87 -0.8 1,423,535 + AZOBR_RS06705 0.87 +1.6 1,423,535 + AZOBR_RS06705 0.87 +0.5 1,423,536 - AZOBR_RS06705 0.87 -3.6 1,423,759 + -0.1 1,423,785 - -0.4 1,424,092 + AZOBR_RS06710 0.28 +0.6 1,424,092 + AZOBR_RS06710 0.28 -1.4 1,424,093 - AZOBR_RS06710 0.28 +1.5 1,424,150 - AZOBR_RS06710 0.35 -0.9 1,424,150 - AZOBR_RS06710 0.35 -0.7 1,424,273 - AZOBR_RS06710 0.50 -1.7 1,424,396 - AZOBR_RS06710 0.65 -2.5 1,424,401 + AZOBR_RS06710 0.65 -2.0 1,424,401 + AZOBR_RS06710 0.65 -0.0 1,424,401 + AZOBR_RS06710 0.65 -1.0 1,424,402 - AZOBR_RS06710 0.65 -2.1 1,424,402 - AZOBR_RS06710 0.65 -0.9 1,424,402 - AZOBR_RS06710 0.65 -2.0 1,424,557 + AZOBR_RS06710 0.84 +0.4 1,424,557 + AZOBR_RS06710 0.84 -3.3 1,424,646 - -0.3 1,424,956 + +2.4 1,424,956 + +0.5 1,424,957 - +0.4 1,425,086 - +0.7 1,425,101 - -0.4 1,425,101 - -0.0 1,425,296 - AZOBR_RS06715 0.11 +0.1 1,425,296 - AZOBR_RS06715 0.11 -1.9 1,425,368 - AZOBR_RS06715 0.13 +0.4 1,425,368 - AZOBR_RS06715 0.13 -0.1 1,425,427 + AZOBR_RS06715 0.15 +0.4 1,425,427 + AZOBR_RS06715 0.15 +0.3 1,425,428 - AZOBR_RS06715 0.15 -2.2
Or see this region's nucleotide sequence