Experiment: 3-octanone 6.3476 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS04075 and AZOBR_RS04080 are separated by 195 nucleotides AZOBR_RS04080 and AZOBR_RS04085 are separated by 108 nucleotides AZOBR_RS04085 and AZOBR_RS04090 are separated by 21 nucleotides
AZOBR_RS04075: AZOBR_RS04075 - gamma-glutamyl phosphate reductase, at 857,416 to 858,696
_RS04075
AZOBR_RS04080: AZOBR_RS04080 - cytochrome C, at 858,892 to 859,758
_RS04080
AZOBR_RS04085: AZOBR_RS04085 - membrane protein, at 859,867 to 860,610
_RS04085
AZOBR_RS04090: AZOBR_RS04090 - haloacid dehalogenase, at 860,632 to 861,300
_RS04090
Position (kb) 858
859
860 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 858.855 kb on - strand at 859.124 kb on - strand, within AZOBR_RS04080 at 859.297 kb on + strand, within AZOBR_RS04080 at 859.297 kb on + strand, within AZOBR_RS04080 at 859.297 kb on + strand, within AZOBR_RS04080 at 859.298 kb on - strand, within AZOBR_RS04080 at 859.298 kb on - strand, within AZOBR_RS04080 at 859.298 kb on - strand, within AZOBR_RS04080 at 859.423 kb on + strand, within AZOBR_RS04080 at 859.432 kb on + strand, within AZOBR_RS04080 at 859.433 kb on - strand, within AZOBR_RS04080 at 859.433 kb on - strand, within AZOBR_RS04080 at 859.640 kb on + strand, within AZOBR_RS04080 at 859.640 kb on + strand, within AZOBR_RS04080 at 859.685 kb on - strand at 859.685 kb on - strand at 859.687 kb on + strand at 859.687 kb on + strand at 859.687 kb on + strand at 859.688 kb on - strand at 859.688 kb on - strand at 859.738 kb on - strand at 859.808 kb on + strand at 859.829 kb on - strand at 859.829 kb on - strand at 860.038 kb on + strand, within AZOBR_RS04085 at 860.230 kb on + strand, within AZOBR_RS04085 at 860.230 kb on + strand, within AZOBR_RS04085 at 860.230 kb on + strand, within AZOBR_RS04085 at 860.231 kb on - strand, within AZOBR_RS04085 at 860.297 kb on - strand, within AZOBR_RS04085 at 860.456 kb on - strand, within AZOBR_RS04085 at 860.588 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 6.3476 mM remove 858,855 - +0.2 859,124 - AZOBR_RS04080 0.27 -0.1 859,297 + AZOBR_RS04080 0.47 -1.3 859,297 + AZOBR_RS04080 0.47 -2.4 859,297 + AZOBR_RS04080 0.47 +0.2 859,298 - AZOBR_RS04080 0.47 -1.9 859,298 - AZOBR_RS04080 0.47 +1.0 859,298 - AZOBR_RS04080 0.47 -2.5 859,423 + AZOBR_RS04080 0.61 -0.2 859,432 + AZOBR_RS04080 0.62 +0.3 859,433 - AZOBR_RS04080 0.62 +0.1 859,433 - AZOBR_RS04080 0.62 +0.6 859,640 + AZOBR_RS04080 0.86 +0.3 859,640 + AZOBR_RS04080 0.86 -0.7 859,685 - -0.8 859,685 - +1.0 859,687 + -0.2 859,687 + -1.6 859,687 + +0.9 859,688 - +0.0 859,688 - -3.2 859,738 - +0.7 859,808 + -0.6 859,829 - -1.3 859,829 - -1.2 860,038 + AZOBR_RS04085 0.23 -1.2 860,230 + AZOBR_RS04085 0.49 -2.7 860,230 + AZOBR_RS04085 0.49 -0.8 860,230 + AZOBR_RS04085 0.49 -2.9 860,231 - AZOBR_RS04085 0.49 +0.7 860,297 - AZOBR_RS04085 0.58 +0.6 860,456 - AZOBR_RS04085 0.79 -0.6 860,588 - -1.7
Or see this region's nucleotide sequence