Experiment: 3-octanone 6.3476 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS22690 and AZOBR_RS22695 are separated by 445 nucleotides AZOBR_RS22695 and AZOBR_RS22700 overlap by 4 nucleotides AZOBR_RS22700 and AZOBR_RS22705 are separated by 46 nucleotides AZOBR_RS22705 and AZOBR_RS22710 are separated by 38 nucleotides
AZOBR_RS22690: AZOBR_RS22690 - sensor protein, at 101,099 to 102,328
_RS22690
AZOBR_RS22695: AZOBR_RS22695 - hypothetical protein, at 102,774 to 102,974
_RS22695
AZOBR_RS22700: AZOBR_RS22700 - hypothetical protein, at 102,971 to 103,423
_RS22700
AZOBR_RS22705: AZOBR_RS22705 - 3-ketoacyl-CoA reductase, at 103,470 to 104,246
_RS22705
AZOBR_RS22710: AZOBR_RS22710 - gluconolactonase, at 104,285 to 105,175
_RS22710
Position (kb) 102
103
104 Strain fitness (log2 ratio) -1
0
1
2
3 at 102.013 kb on - strand, within AZOBR_RS22690 at 102.013 kb on - strand, within AZOBR_RS22690 at 102.013 kb on - strand, within AZOBR_RS22690 at 102.013 kb on - strand, within AZOBR_RS22690 at 102.013 kb on - strand, within AZOBR_RS22690 at 102.013 kb on - strand, within AZOBR_RS22690 at 102.239 kb on - strand at 102.564 kb on - strand at 102.691 kb on + strand at 102.693 kb on + strand at 102.693 kb on + strand at 102.693 kb on + strand at 102.693 kb on + strand at 102.694 kb on - strand at 102.847 kb on - strand, within AZOBR_RS22695 at 103.036 kb on + strand, within AZOBR_RS22700 at 103.244 kb on + strand, within AZOBR_RS22700 at 103.456 kb on - strand at 103.456 kb on - strand at 103.480 kb on + strand at 103.480 kb on + strand at 103.480 kb on + strand at 103.480 kb on + strand at 103.480 kb on + strand at 103.480 kb on + strand at 103.481 kb on - strand at 103.481 kb on - strand at 103.786 kb on + strand, within AZOBR_RS22705
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 6.3476 mM remove 102,013 - AZOBR_RS22690 0.74 +1.2 102,013 - AZOBR_RS22690 0.74 -0.3 102,013 - AZOBR_RS22690 0.74 +0.0 102,013 - AZOBR_RS22690 0.74 +1.2 102,013 - AZOBR_RS22690 0.74 -1.1 102,013 - AZOBR_RS22690 0.74 +2.8 102,239 - -1.3 102,564 - +2.0 102,691 + -0.0 102,693 + +0.8 102,693 + +1.0 102,693 + -1.2 102,693 + -1.3 102,694 - +0.4 102,847 - AZOBR_RS22695 0.36 -1.1 103,036 + AZOBR_RS22700 0.14 -0.8 103,244 + AZOBR_RS22700 0.60 +0.6 103,456 - +0.1 103,456 - -0.4 103,480 + -1.0 103,480 + +0.4 103,480 + +0.7 103,480 + +0.7 103,480 + -0.3 103,480 + +0.5 103,481 - -0.4 103,481 - -0.2 103,786 + AZOBR_RS22705 0.41 -0.1
Or see this region's nucleotide sequence