Experiment: 3-octanone 6.3476 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS29160 and AZOBR_RS29165 are separated by 597 nucleotides
AZOBR_RS29160: AZOBR_RS29160 - putative RNA polymerase sigma-70 factor ECF subfamily, at 666,689 to 667,213
_RS29160
AZOBR_RS29165: AZOBR_RS29165 - hypothetical protein, at 667,811 to 668,326
_RS29165
Position (kb) 667
668
669 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 666.819 kb on + strand, within AZOBR_RS29160 at 666.819 kb on + strand, within AZOBR_RS29160 at 666.819 kb on + strand, within AZOBR_RS29160 at 666.820 kb on - strand, within AZOBR_RS29160 at 666.820 kb on - strand, within AZOBR_RS29160 at 667.020 kb on + strand, within AZOBR_RS29160 at 667.020 kb on + strand, within AZOBR_RS29160 at 667.020 kb on + strand, within AZOBR_RS29160 at 667.020 kb on + strand, within AZOBR_RS29160 at 667.021 kb on - strand, within AZOBR_RS29160 at 667.021 kb on - strand, within AZOBR_RS29160 at 667.021 kb on - strand, within AZOBR_RS29160 at 667.021 kb on - strand, within AZOBR_RS29160 at 667.021 kb on - strand, within AZOBR_RS29160 at 667.021 kb on - strand, within AZOBR_RS29160 at 667.021 kb on - strand, within AZOBR_RS29160 at 667.377 kb on + strand at 667.396 kb on + strand at 667.454 kb on + strand at 667.882 kb on + strand, within AZOBR_RS29165 at 667.950 kb on + strand, within AZOBR_RS29165 at 667.950 kb on + strand, within AZOBR_RS29165 at 667.951 kb on - strand, within AZOBR_RS29165 at 668.190 kb on + strand, within AZOBR_RS29165 at 668.190 kb on + strand, within AZOBR_RS29165 at 668.191 kb on - strand, within AZOBR_RS29165 at 668.237 kb on + strand, within AZOBR_RS29165 at 668.237 kb on + strand, within AZOBR_RS29165 at 668.237 kb on + strand, within AZOBR_RS29165 at 668.238 kb on - strand, within AZOBR_RS29165 at 668.238 kb on - strand, within AZOBR_RS29165 at 668.342 kb on + strand at 668.371 kb on + strand at 668.372 kb on - strand at 668.489 kb on + strand at 668.621 kb on + strand at 668.621 kb on + strand at 668.710 kb on + strand at 668.710 kb on + strand at 668.710 kb on + strand at 668.710 kb on + strand at 668.710 kb on + strand at 668.711 kb on - strand at 668.711 kb on - strand at 668.711 kb on - strand at 668.715 kb on - strand at 668.715 kb on - strand at 668.764 kb on + strand at 668.764 kb on + strand at 668.876 kb on + strand at 668.877 kb on - strand at 668.957 kb on + strand at 668.957 kb on + strand at 668.957 kb on + strand at 668.958 kb on - strand at 669.149 kb on + strand at 669.207 kb on + strand at 669.207 kb on + strand at 669.207 kb on + strand at 669.207 kb on + strand at 669.208 kb on - strand at 669.242 kb on + strand at 669.243 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 6.3476 mM remove 666,819 + AZOBR_RS29160 0.25 -0.1 666,819 + AZOBR_RS29160 0.25 +0.3 666,819 + AZOBR_RS29160 0.25 +0.7 666,820 - AZOBR_RS29160 0.25 +1.1 666,820 - AZOBR_RS29160 0.25 -1.9 667,020 + AZOBR_RS29160 0.63 +0.8 667,020 + AZOBR_RS29160 0.63 +0.3 667,020 + AZOBR_RS29160 0.63 -3.7 667,020 + AZOBR_RS29160 0.63 -1.3 667,021 - AZOBR_RS29160 0.63 -0.5 667,021 - AZOBR_RS29160 0.63 -0.9 667,021 - AZOBR_RS29160 0.63 +1.0 667,021 - AZOBR_RS29160 0.63 +0.8 667,021 - AZOBR_RS29160 0.63 +0.1 667,021 - AZOBR_RS29160 0.63 -1.4 667,021 - AZOBR_RS29160 0.63 -2.6 667,377 + +2.1 667,396 + +0.1 667,454 + +0.5 667,882 + AZOBR_RS29165 0.14 -1.6 667,950 + AZOBR_RS29165 0.27 -2.4 667,950 + AZOBR_RS29165 0.27 +0.6 667,951 - AZOBR_RS29165 0.27 -0.5 668,190 + AZOBR_RS29165 0.73 -0.2 668,190 + AZOBR_RS29165 0.73 +0.7 668,191 - AZOBR_RS29165 0.74 -0.0 668,237 + AZOBR_RS29165 0.83 -0.2 668,237 + AZOBR_RS29165 0.83 -0.3 668,237 + AZOBR_RS29165 0.83 +1.7 668,238 - AZOBR_RS29165 0.83 -0.7 668,238 - AZOBR_RS29165 0.83 -1.6 668,342 + +2.3 668,371 + -2.9 668,372 - +0.6 668,489 + -1.3 668,621 + +0.8 668,621 + +0.3 668,710 + -0.7 668,710 + +0.1 668,710 + +0.5 668,710 + -0.2 668,710 + -0.1 668,711 - -0.7 668,711 - +0.1 668,711 - -0.9 668,715 - +1.8 668,715 - -0.7 668,764 + -0.1 668,764 + +1.5 668,876 + -0.0 668,877 - +0.2 668,957 + +0.3 668,957 + -1.3 668,957 + -0.6 668,958 - -0.2 669,149 + +0.1 669,207 + +0.3 669,207 + +0.6 669,207 + -0.6 669,207 + -0.4 669,208 - +2.2 669,242 + -2.3 669,243 - -1.5
Or see this region's nucleotide sequence