Experiment: 3-octanone 6.3476 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS26585 and AZOBR_RS26590 are separated by 121 nucleotides AZOBR_RS26590 and AZOBR_RS26595 are separated by 110 nucleotides
AZOBR_RS26585: AZOBR_RS26585 - AraC family transcriptional regulator, at 108,753 to 109,709
_RS26585
AZOBR_RS26590: AZOBR_RS26590 - AraC family transcriptional regulator, at 109,831 to 110,640
_RS26590
AZOBR_RS26595: AZOBR_RS26595 - membrane protein, at 110,751 to 112,298
_RS26595
Position (kb)
109
110
111 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 109.073 kb on - strand, within AZOBR_RS26585 at 109.159 kb on + strand, within AZOBR_RS26585 at 109.159 kb on + strand, within AZOBR_RS26585 at 109.159 kb on + strand, within AZOBR_RS26585 at 109.160 kb on - strand, within AZOBR_RS26585 at 109.160 kb on - strand, within AZOBR_RS26585 at 109.160 kb on - strand, within AZOBR_RS26585 at 109.160 kb on - strand, within AZOBR_RS26585 at 109.160 kb on - strand, within AZOBR_RS26585 at 109.160 kb on - strand, within AZOBR_RS26585 at 109.160 kb on - strand, within AZOBR_RS26585 at 109.609 kb on + strand, within AZOBR_RS26585 at 109.609 kb on + strand, within AZOBR_RS26585 at 109.609 kb on + strand, within AZOBR_RS26585 at 109.609 kb on + strand, within AZOBR_RS26585 at 109.610 kb on - strand, within AZOBR_RS26585 at 109.610 kb on - strand, within AZOBR_RS26585 at 109.610 kb on - strand, within AZOBR_RS26585 at 109.610 kb on - strand, within AZOBR_RS26585 at 109.610 kb on - strand, within AZOBR_RS26585 at 109.610 kb on - strand, within AZOBR_RS26585 at 109.610 kb on - strand, within AZOBR_RS26585 at 109.688 kb on - strand at 109.688 kb on - strand at 109.774 kb on + strand at 109.775 kb on - strand at 109.775 kb on - strand at 109.775 kb on - strand at 109.775 kb on - strand at 109.775 kb on - strand at 109.775 kb on - strand at 109.895 kb on - strand at 110.197 kb on + strand, within AZOBR_RS26590 at 110.198 kb on - strand, within AZOBR_RS26590 at 110.294 kb on - strand, within AZOBR_RS26590 at 110.554 kb on + strand, within AZOBR_RS26590 at 110.555 kb on - strand, within AZOBR_RS26590 at 111.226 kb on + strand, within AZOBR_RS26595 at 111.226 kb on + strand, within AZOBR_RS26595 at 111.227 kb on - strand, within AZOBR_RS26595 at 111.227 kb on - strand, within AZOBR_RS26595 at 111.407 kb on + strand, within AZOBR_RS26595 at 111.408 kb on - strand, within AZOBR_RS26595
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 6.3476 mM remove 109,073 - AZOBR_RS26585 0.33 -0.8 109,159 + AZOBR_RS26585 0.42 +0.5 109,159 + AZOBR_RS26585 0.42 +0.5 109,159 + AZOBR_RS26585 0.42 +1.1 109,160 - AZOBR_RS26585 0.43 -0.1 109,160 - AZOBR_RS26585 0.43 -1.9 109,160 - AZOBR_RS26585 0.43 -2.2 109,160 - AZOBR_RS26585 0.43 -0.3 109,160 - AZOBR_RS26585 0.43 +1.0 109,160 - AZOBR_RS26585 0.43 +0.7 109,160 - AZOBR_RS26585 0.43 -0.1 109,609 + AZOBR_RS26585 0.89 -1.8 109,609 + AZOBR_RS26585 0.89 -0.0 109,609 + AZOBR_RS26585 0.89 +0.3 109,609 + AZOBR_RS26585 0.89 -1.3 109,610 - AZOBR_RS26585 0.90 -0.6 109,610 - AZOBR_RS26585 0.90 -0.2 109,610 - AZOBR_RS26585 0.90 +0.5 109,610 - AZOBR_RS26585 0.90 +0.5 109,610 - AZOBR_RS26585 0.90 +0.4 109,610 - AZOBR_RS26585 0.90 +0.0 109,610 - AZOBR_RS26585 0.90 +0.7 109,688 - +2.6 109,688 - -2.2 109,774 + +0.8 109,775 - -1.7 109,775 - -1.8 109,775 - -0.7 109,775 - +0.1 109,775 - -0.6 109,775 - -1.3 109,895 - +0.3 110,197 + AZOBR_RS26590 0.45 -2.1 110,198 - AZOBR_RS26590 0.45 -0.5 110,294 - AZOBR_RS26590 0.57 -0.8 110,554 + AZOBR_RS26590 0.89 -1.0 110,555 - AZOBR_RS26590 0.89 -0.7 111,226 + AZOBR_RS26595 0.31 +0.9 111,226 + AZOBR_RS26595 0.31 +2.1 111,227 - AZOBR_RS26595 0.31 -2.2 111,227 - AZOBR_RS26595 0.31 -0.3 111,407 + AZOBR_RS26595 0.42 +0.1 111,408 - AZOBR_RS26595 0.42 +0.4
Or see this region's nucleotide sequence