Experiment: 3-octanone 6.3476 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS26510 and AZOBR_RS26515 overlap by 8 nucleotides AZOBR_RS26515 and AZOBR_RS26520 are separated by 147 nucleotides AZOBR_RS26520 and AZOBR_RS26525 are separated by 230 nucleotides
AZOBR_RS26510: AZOBR_RS26510 - branched-chain amino acid ABC transporter permease, at 93,061 to 94,857
_RS26510
AZOBR_RS26515: AZOBR_RS26515 - branched-chain amino acid ABC transporter, at 94,850 to 95,572
_RS26515
AZOBR_RS26520: AZOBR_RS26520 - alcohol dehydrogenase, at 95,720 to 96,886
_RS26520
AZOBR_RS26525: AZOBR_RS26525 - putative transcriptional regulator, at 97,117 to 97,962
_RS26525
Position (kb)
95
96
97 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 94.762 kb on + strand at 94.763 kb on - strand at 94.763 kb on - strand at 94.763 kb on - strand at 94.763 kb on - strand at 94.786 kb on + strand at 94.786 kb on + strand at 94.786 kb on + strand at 94.813 kb on + strand at 94.814 kb on - strand at 94.929 kb on + strand, within AZOBR_RS26515 at 95.216 kb on + strand, within AZOBR_RS26515 at 95.558 kb on + strand at 95.558 kb on + strand at 95.559 kb on - strand at 95.664 kb on + strand at 95.765 kb on + strand at 95.766 kb on - strand at 96.257 kb on + strand, within AZOBR_RS26520 at 96.258 kb on - strand, within AZOBR_RS26520 at 96.999 kb on + strand at 97.000 kb on - strand at 97.069 kb on + strand at 97.070 kb on - strand at 97.078 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 6.3476 mM remove 94,762 + +0.4 94,763 - -0.2 94,763 - +0.5 94,763 - -0.6 94,763 - +1.0 94,786 + -2.5 94,786 + +1.2 94,786 + +0.5 94,813 + -0.3 94,814 - -1.7 94,929 + AZOBR_RS26515 0.11 -2.5 95,216 + AZOBR_RS26515 0.51 +0.4 95,558 + +0.1 95,558 + -0.1 95,559 - -1.2 95,664 + +1.6 95,765 + -1.7 95,766 - -0.5 96,257 + AZOBR_RS26520 0.46 +2.1 96,258 - AZOBR_RS26520 0.46 +1.7 96,999 + -0.7 97,000 - +0.4 97,069 + +0.4 97,070 - -0.9 97,078 + +0.4
Or see this region's nucleotide sequence