Experiment: 3-octanone 6.3476 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS22120 and AZOBR_RS22125 are separated by 677 nucleotides AZOBR_RS22125 and AZOBR_RS22130 are separated by 3 nucleotides
AZOBR_RS22120: AZOBR_RS22120 - hypothetical protein, at 1,727,713 to 1,728,528
_RS22120
AZOBR_RS22125: AZOBR_RS22125 - secretion protein, at 1,729,206 to 1,730,339
_RS22125
AZOBR_RS22130: AZOBR_RS22130 - acriflavin resistance protein, at 1,730,343 to 1,733,465
_RS22130
Position (kb)
1729
1730
1731 Strain fitness (log2 ratio)
-2
-1
0
1 at 1728.350 kb on + strand, within AZOBR_RS22120 at 1728.627 kb on + strand at 1728.627 kb on + strand at 1728.628 kb on - strand at 1728.871 kb on - strand at 1729.105 kb on - strand at 1729.106 kb on + strand at 1729.107 kb on - strand at 1729.201 kb on + strand at 1729.267 kb on - strand at 1729.272 kb on + strand at 1729.893 kb on + strand, within AZOBR_RS22125 at 1729.893 kb on + strand, within AZOBR_RS22125 at 1729.894 kb on - strand, within AZOBR_RS22125 at 1729.894 kb on - strand, within AZOBR_RS22125 at 1729.894 kb on - strand, within AZOBR_RS22125 at 1729.894 kb on - strand, within AZOBR_RS22125 at 1729.974 kb on + strand, within AZOBR_RS22125 at 1729.974 kb on + strand, within AZOBR_RS22125 at 1729.974 kb on + strand, within AZOBR_RS22125 at 1730.493 kb on + strand at 1730.493 kb on + strand at 1730.494 kb on - strand at 1730.494 kb on - strand at 1730.494 kb on - strand at 1730.760 kb on + strand, within AZOBR_RS22130 at 1730.760 kb on + strand, within AZOBR_RS22130 at 1730.760 kb on + strand, within AZOBR_RS22130 at 1730.760 kb on + strand, within AZOBR_RS22130 at 1731.094 kb on - strand, within AZOBR_RS22130 at 1731.094 kb on - strand, within AZOBR_RS22130 at 1731.095 kb on + strand, within AZOBR_RS22130 at 1731.096 kb on - strand, within AZOBR_RS22130 at 1731.096 kb on - strand, within AZOBR_RS22130 at 1731.096 kb on - strand, within AZOBR_RS22130 at 1731.096 kb on - strand, within AZOBR_RS22130 at 1731.096 kb on - strand, within AZOBR_RS22130 at 1731.096 kb on - strand, within AZOBR_RS22130
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 6.3476 mM remove 1,728,350 + AZOBR_RS22120 0.78 -0.6 1,728,627 + +0.7 1,728,627 + -0.2 1,728,628 - -2.3 1,728,871 - +0.1 1,729,105 - -2.0 1,729,106 + +1.4 1,729,107 - -1.4 1,729,201 + -1.3 1,729,267 - -0.2 1,729,272 + -1.7 1,729,893 + AZOBR_RS22125 0.61 +0.2 1,729,893 + AZOBR_RS22125 0.61 +0.1 1,729,894 - AZOBR_RS22125 0.61 +0.6 1,729,894 - AZOBR_RS22125 0.61 -2.1 1,729,894 - AZOBR_RS22125 0.61 +0.1 1,729,894 - AZOBR_RS22125 0.61 -0.2 1,729,974 + AZOBR_RS22125 0.68 +0.2 1,729,974 + AZOBR_RS22125 0.68 -0.4 1,729,974 + AZOBR_RS22125 0.68 +0.6 1,730,493 + +0.1 1,730,493 + +0.4 1,730,494 - -0.9 1,730,494 - +0.9 1,730,494 - -0.4 1,730,760 + AZOBR_RS22130 0.13 -0.6 1,730,760 + AZOBR_RS22130 0.13 -1.0 1,730,760 + AZOBR_RS22130 0.13 -1.0 1,730,760 + AZOBR_RS22130 0.13 -1.3 1,731,094 - AZOBR_RS22130 0.24 +0.2 1,731,094 - AZOBR_RS22130 0.24 +0.1 1,731,095 + AZOBR_RS22130 0.24 -0.5 1,731,096 - AZOBR_RS22130 0.24 +0.9 1,731,096 - AZOBR_RS22130 0.24 -0.4 1,731,096 - AZOBR_RS22130 0.24 +0.7 1,731,096 - AZOBR_RS22130 0.24 +1.0 1,731,096 - AZOBR_RS22130 0.24 +0.6 1,731,096 - AZOBR_RS22130 0.24 +0.2
Or see this region's nucleotide sequence