Experiment: 3-octanone 6.3476 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS13205 and AZOBR_RS13210 are separated by 37 nucleotides AZOBR_RS13210 and AZOBR_RS13215 are separated by 15 nucleotides
AZOBR_RS13205: AZOBR_RS13205 - hypothetical protein, at 2,789,786 to 2,791,750
_RS13205
AZOBR_RS13210: AZOBR_RS13210 - hypothetical protein, at 2,791,788 to 2,793,032
_RS13210
AZOBR_RS13215: AZOBR_RS13215 - putative peptidase (S8 and S53 subtilisin kexin sedolisin family) (fragment), at 2,793,048 to 2,794,703
_RS13215
Position (kb)
2791
2792
2793
2794 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2790.898 kb on - strand, within AZOBR_RS13205 at 2790.898 kb on - strand, within AZOBR_RS13205 at 2791.070 kb on + strand, within AZOBR_RS13205 at 2791.070 kb on + strand, within AZOBR_RS13205 at 2791.070 kb on + strand, within AZOBR_RS13205 at 2791.071 kb on - strand, within AZOBR_RS13205 at 2791.071 kb on - strand, within AZOBR_RS13205 at 2791.142 kb on + strand, within AZOBR_RS13205 at 2791.247 kb on + strand, within AZOBR_RS13205 at 2791.247 kb on + strand, within AZOBR_RS13205 at 2791.248 kb on - strand, within AZOBR_RS13205 at 2791.248 kb on - strand, within AZOBR_RS13205 at 2791.248 kb on - strand, within AZOBR_RS13205 at 2791.248 kb on - strand, within AZOBR_RS13205 at 2791.248 kb on - strand, within AZOBR_RS13205 at 2791.254 kb on + strand, within AZOBR_RS13205 at 2791.254 kb on + strand, within AZOBR_RS13205 at 2791.255 kb on - strand, within AZOBR_RS13205 at 2791.255 kb on - strand, within AZOBR_RS13205 at 2791.255 kb on - strand, within AZOBR_RS13205 at 2791.255 kb on - strand, within AZOBR_RS13205 at 2791.255 kb on - strand, within AZOBR_RS13205 at 2791.846 kb on + strand at 2791.846 kb on + strand at 2791.847 kb on - strand at 2791.847 kb on - strand at 2791.847 kb on - strand at 2791.847 kb on - strand at 2792.063 kb on - strand, within AZOBR_RS13210 at 2792.383 kb on + strand, within AZOBR_RS13210 at 2792.383 kb on + strand, within AZOBR_RS13210 at 2792.383 kb on + strand, within AZOBR_RS13210 at 2792.384 kb on - strand, within AZOBR_RS13210 at 2792.384 kb on - strand, within AZOBR_RS13210 at 2792.522 kb on - strand, within AZOBR_RS13210 at 2792.587 kb on + strand, within AZOBR_RS13210 at 2792.587 kb on + strand, within AZOBR_RS13210 at 2792.587 kb on + strand, within AZOBR_RS13210 at 2792.936 kb on + strand at 2792.936 kb on + strand at 2792.937 kb on - strand at 2793.217 kb on + strand, within AZOBR_RS13215 at 2793.217 kb on + strand, within AZOBR_RS13215 at 2793.217 kb on + strand, within AZOBR_RS13215 at 2793.218 kb on - strand, within AZOBR_RS13215 at 2793.218 kb on - strand, within AZOBR_RS13215 at 2793.544 kb on + strand, within AZOBR_RS13215 at 2793.544 kb on + strand, within AZOBR_RS13215 at 2793.544 kb on + strand, within AZOBR_RS13215 at 2793.544 kb on + strand, within AZOBR_RS13215 at 2793.545 kb on - strand, within AZOBR_RS13215 at 2793.545 kb on - strand, within AZOBR_RS13215 at 2793.616 kb on + strand, within AZOBR_RS13215 at 2793.652 kb on + strand, within AZOBR_RS13215 at 2793.652 kb on + strand, within AZOBR_RS13215 at 2793.652 kb on + strand, within AZOBR_RS13215 at 2793.653 kb on - strand, within AZOBR_RS13215 at 2793.653 kb on - strand, within AZOBR_RS13215 at 2793.653 kb on - strand, within AZOBR_RS13215 at 2793.653 kb on - strand, within AZOBR_RS13215 at 2793.722 kb on - strand, within AZOBR_RS13215 at 2793.735 kb on + strand, within AZOBR_RS13215 at 2793.735 kb on + strand, within AZOBR_RS13215 at 2793.736 kb on - strand, within AZOBR_RS13215 at 2793.937 kb on - strand, within AZOBR_RS13215 at 2793.950 kb on - strand, within AZOBR_RS13215
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 6.3476 mM remove 2,790,898 - AZOBR_RS13205 0.57 -1.1 2,790,898 - AZOBR_RS13205 0.57 -0.2 2,791,070 + AZOBR_RS13205 0.65 -1.1 2,791,070 + AZOBR_RS13205 0.65 +1.0 2,791,070 + AZOBR_RS13205 0.65 -2.8 2,791,071 - AZOBR_RS13205 0.65 -0.7 2,791,071 - AZOBR_RS13205 0.65 +0.9 2,791,142 + AZOBR_RS13205 0.69 -0.2 2,791,247 + AZOBR_RS13205 0.74 +0.5 2,791,247 + AZOBR_RS13205 0.74 -0.6 2,791,248 - AZOBR_RS13205 0.74 -0.0 2,791,248 - AZOBR_RS13205 0.74 -0.4 2,791,248 - AZOBR_RS13205 0.74 +0.9 2,791,248 - AZOBR_RS13205 0.74 -0.1 2,791,248 - AZOBR_RS13205 0.74 -1.5 2,791,254 + AZOBR_RS13205 0.75 -1.1 2,791,254 + AZOBR_RS13205 0.75 -0.4 2,791,255 - AZOBR_RS13205 0.75 +0.9 2,791,255 - AZOBR_RS13205 0.75 -0.1 2,791,255 - AZOBR_RS13205 0.75 -0.9 2,791,255 - AZOBR_RS13205 0.75 +0.9 2,791,255 - AZOBR_RS13205 0.75 +1.9 2,791,846 + -0.3 2,791,846 + +0.8 2,791,847 - -1.1 2,791,847 - -0.2 2,791,847 - +0.1 2,791,847 - +0.4 2,792,063 - AZOBR_RS13210 0.22 +0.7 2,792,383 + AZOBR_RS13210 0.48 -0.2 2,792,383 + AZOBR_RS13210 0.48 +0.2 2,792,383 + AZOBR_RS13210 0.48 -1.5 2,792,384 - AZOBR_RS13210 0.48 +0.1 2,792,384 - AZOBR_RS13210 0.48 +0.3 2,792,522 - AZOBR_RS13210 0.59 +0.5 2,792,587 + AZOBR_RS13210 0.64 -1.7 2,792,587 + AZOBR_RS13210 0.64 -2.3 2,792,587 + AZOBR_RS13210 0.64 -0.4 2,792,936 + +0.5 2,792,936 + -0.6 2,792,937 - +1.9 2,793,217 + AZOBR_RS13215 0.10 +0.7 2,793,217 + AZOBR_RS13215 0.10 +2.9 2,793,217 + AZOBR_RS13215 0.10 -1.3 2,793,218 - AZOBR_RS13215 0.10 -1.4 2,793,218 - AZOBR_RS13215 0.10 -0.8 2,793,544 + AZOBR_RS13215 0.30 +0.7 2,793,544 + AZOBR_RS13215 0.30 +0.1 2,793,544 + AZOBR_RS13215 0.30 -1.1 2,793,544 + AZOBR_RS13215 0.30 +0.2 2,793,545 - AZOBR_RS13215 0.30 +1.4 2,793,545 - AZOBR_RS13215 0.30 +0.3 2,793,616 + AZOBR_RS13215 0.34 -0.4 2,793,652 + AZOBR_RS13215 0.36 +0.7 2,793,652 + AZOBR_RS13215 0.36 +0.2 2,793,652 + AZOBR_RS13215 0.36 -1.8 2,793,653 - AZOBR_RS13215 0.37 -0.3 2,793,653 - AZOBR_RS13215 0.37 -0.0 2,793,653 - AZOBR_RS13215 0.37 +0.3 2,793,653 - AZOBR_RS13215 0.37 -2.2 2,793,722 - AZOBR_RS13215 0.41 +0.5 2,793,735 + AZOBR_RS13215 0.41 -1.1 2,793,735 + AZOBR_RS13215 0.41 -3.2 2,793,736 - AZOBR_RS13215 0.42 +0.8 2,793,937 - AZOBR_RS13215 0.54 +0.6 2,793,950 - AZOBR_RS13215 0.54 -2.7
Or see this region's nucleotide sequence