Experiment: 3-octanone 6.3476 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS09475 and AZOBR_RS09480 are separated by 222 nucleotides AZOBR_RS09480 and AZOBR_RS09485 are separated by 123 nucleotides AZOBR_RS09485 and AZOBR_RS09490 are separated by 64 nucleotides
AZOBR_RS09475: AZOBR_RS09475 - regulator, at 1,983,146 to 1,984,198
_RS09475
AZOBR_RS09480: AZOBR_RS09480 - 4-alpha-glucanotransferase, at 1,984,421 to 1,986,610
_RS09480
AZOBR_RS09485: AZOBR_RS09485 - bacterioferritin, at 1,986,734 to 1,987,219
_RS09485
AZOBR_RS09490: AZOBR_RS09490 - hypothetical protein, at 1,987,284 to 1,987,634
_RS09490
Position (kb)
1984
1985
1986
1987 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1983.566 kb on + strand, within AZOBR_RS09475 at 1983.566 kb on + strand, within AZOBR_RS09475 at 1983.567 kb on - strand, within AZOBR_RS09475 at 1984.469 kb on + strand at 1984.469 kb on + strand at 1984.469 kb on + strand at 1984.470 kb on - strand at 1984.470 kb on - strand at 1984.470 kb on - strand at 1984.470 kb on - strand at 1984.470 kb on - strand at 1984.470 kb on - strand at 1984.847 kb on + strand, within AZOBR_RS09480 at 1984.847 kb on + strand, within AZOBR_RS09480 at 1985.144 kb on + strand, within AZOBR_RS09480 at 1985.180 kb on + strand, within AZOBR_RS09480 at 1985.181 kb on - strand, within AZOBR_RS09480 at 1985.181 kb on - strand, within AZOBR_RS09480 at 1985.181 kb on - strand, within AZOBR_RS09480 at 1985.585 kb on + strand, within AZOBR_RS09480 at 1985.585 kb on + strand, within AZOBR_RS09480 at 1985.832 kb on - strand, within AZOBR_RS09480 at 1985.951 kb on + strand, within AZOBR_RS09480 at 1985.951 kb on + strand, within AZOBR_RS09480 at 1986.104 kb on + strand, within AZOBR_RS09480 at 1986.105 kb on - strand, within AZOBR_RS09480 at 1986.413 kb on + strand at 1986.414 kb on - strand at 1986.655 kb on + strand at 1986.655 kb on + strand at 1986.656 kb on - strand at 1986.731 kb on + strand at 1986.732 kb on - strand at 1986.732 kb on - strand at 1986.917 kb on - strand, within AZOBR_RS09485 at 1987.178 kb on + strand at 1987.196 kb on + strand at 1987.196 kb on + strand at 1987.196 kb on + strand at 1987.196 kb on + strand at 1987.197 kb on - strand at 1987.197 kb on - strand at 1987.197 kb on - strand at 1987.217 kb on + strand at 1987.277 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 6.3476 mM remove 1,983,566 + AZOBR_RS09475 0.40 -2.2 1,983,566 + AZOBR_RS09475 0.40 +0.3 1,983,567 - AZOBR_RS09475 0.40 +1.0 1,984,469 + -0.2 1,984,469 + -0.7 1,984,469 + -0.6 1,984,470 - +0.4 1,984,470 - -0.4 1,984,470 - -1.6 1,984,470 - +1.2 1,984,470 - -1.6 1,984,470 - -1.8 1,984,847 + AZOBR_RS09480 0.19 +0.5 1,984,847 + AZOBR_RS09480 0.19 +0.5 1,985,144 + AZOBR_RS09480 0.33 -2.3 1,985,180 + AZOBR_RS09480 0.35 -1.0 1,985,181 - AZOBR_RS09480 0.35 -0.1 1,985,181 - AZOBR_RS09480 0.35 +0.5 1,985,181 - AZOBR_RS09480 0.35 -0.5 1,985,585 + AZOBR_RS09480 0.53 +0.8 1,985,585 + AZOBR_RS09480 0.53 -1.2 1,985,832 - AZOBR_RS09480 0.64 -1.3 1,985,951 + AZOBR_RS09480 0.70 -0.9 1,985,951 + AZOBR_RS09480 0.70 -1.6 1,986,104 + AZOBR_RS09480 0.77 +0.3 1,986,105 - AZOBR_RS09480 0.77 -0.9 1,986,413 + +0.9 1,986,414 - +0.7 1,986,655 + -0.7 1,986,655 + +1.0 1,986,656 - +0.0 1,986,731 + +0.1 1,986,732 - -3.0 1,986,732 - -0.6 1,986,917 - AZOBR_RS09485 0.38 -0.3 1,987,178 + -0.5 1,987,196 + -0.4 1,987,196 + +2.1 1,987,196 + +0.9 1,987,196 + -0.4 1,987,197 - +1.5 1,987,197 - -0.4 1,987,197 - -0.3 1,987,217 + +1.5 1,987,277 - -1.3
Or see this region's nucleotide sequence