Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS08755

Experiment: 3-octanone 6.3476 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAZOBR_RS08750 and AZOBR_RS08755 are separated by 50 nucleotidesAZOBR_RS08755 and AZOBR_RS08760 are separated by 94 nucleotides AZOBR_RS08750: AZOBR_RS08750 - hypothetical protein, at 1,828,764 to 1,829,423 _RS08750 AZOBR_RS08755: AZOBR_RS08755 - valyl-tRNA synthetase, at 1,829,474 to 1,832,131 _RS08755 AZOBR_RS08760: AZOBR_RS08760 - putative methyl-accepting chemotaxis protein, at 1,832,226 to 1,834,184 _RS08760 Position (kb) 1829 1830 1831 1832 1833Strain fitness (log2 ratio) -2 -1 0 1at 1828.526 kb on - strandat 1828.526 kb on - strandat 1828.544 kb on - strandat 1828.544 kb on - strandat 1829.043 kb on + strand, within AZOBR_RS08750at 1832.305 kb on + strandat 1832.306 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 3-octanone 6.3476 mM
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1,828,526 - -0.7
1,828,526 - +0.6
1,828,544 - +1.3
1,828,544 - +0.6
1,829,043 + AZOBR_RS08750 0.42 -2.1
1,832,305 + -0.3
1,832,306 - +0.9

Or see this region's nucleotide sequence