Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS06350

Experiment: 3-octanone 6.3476 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAZOBR_RS06340 and AZOBR_RS06345 are separated by 77 nucleotidesAZOBR_RS06345 and AZOBR_RS06350 are separated by 292 nucleotidesAZOBR_RS06350 and AZOBR_RS06355 are separated by 129 nucleotides AZOBR_RS06340: AZOBR_RS06340 - acyl-CoA synthetase, at 1,342,618 to 1,344,540 _RS06340 AZOBR_RS06345: AZOBR_RS06345 - hypothetical protein, at 1,344,618 to 1,344,914 _RS06345 AZOBR_RS06350: AZOBR_RS06350 - thiosulfate sulfurtransferase, at 1,345,207 to 1,346,139 _RS06350 AZOBR_RS06355: AZOBR_RS06355 - membrane protein, at 1,346,269 to 1,347,450 _RS06355 Position (kb) 1345 1346 1347Strain fitness (log2 ratio) -2 -1 0 1at 1344.442 kb on + strandat 1344.926 kb on + strandat 1344.926 kb on + strandat 1344.926 kb on + strandat 1345.378 kb on + strand, within AZOBR_RS06350at 1345.579 kb on + strand, within AZOBR_RS06350at 1345.579 kb on + strand, within AZOBR_RS06350at 1345.681 kb on + strand, within AZOBR_RS06350at 1345.681 kb on + strand, within AZOBR_RS06350at 1345.681 kb on + strand, within AZOBR_RS06350at 1345.682 kb on - strand, within AZOBR_RS06350at 1345.682 kb on - strand, within AZOBR_RS06350at 1345.682 kb on - strand, within AZOBR_RS06350at 1345.793 kb on - strand, within AZOBR_RS06350at 1345.981 kb on + strand, within AZOBR_RS06350at 1345.981 kb on + strand, within AZOBR_RS06350at 1345.981 kb on + strand, within AZOBR_RS06350at 1345.982 kb on - strand, within AZOBR_RS06350at 1345.982 kb on - strand, within AZOBR_RS06350at 1345.982 kb on - strand, within AZOBR_RS06350at 1346.056 kb on + strandat 1346.057 kb on - strandat 1346.057 kb on - strandat 1346.118 kb on + strandat 1346.326 kb on + strandat 1346.515 kb on + strand, within AZOBR_RS06355at 1346.516 kb on - strand, within AZOBR_RS06355at 1346.764 kb on + strand, within AZOBR_RS06355at 1346.764 kb on + strand, within AZOBR_RS06355at 1346.764 kb on + strand, within AZOBR_RS06355at 1346.764 kb on + strand, within AZOBR_RS06355at 1346.765 kb on - strand, within AZOBR_RS06355at 1346.765 kb on - strand, within AZOBR_RS06355at 1346.765 kb on - strand, within AZOBR_RS06355at 1346.765 kb on - strand, within AZOBR_RS06355at 1346.974 kb on + strand, within AZOBR_RS06355

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Per-strain Table

Position Strand Gene LocusTag Fraction 3-octanone 6.3476 mM
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1,344,442 + +0.5
1,344,926 + +0.6
1,344,926 + +1.0
1,344,926 + -1.7
1,345,378 + AZOBR_RS06350 0.18 -0.4
1,345,579 + AZOBR_RS06350 0.40 +0.7
1,345,579 + AZOBR_RS06350 0.40 +0.5
1,345,681 + AZOBR_RS06350 0.51 -0.5
1,345,681 + AZOBR_RS06350 0.51 +1.4
1,345,681 + AZOBR_RS06350 0.51 -1.0
1,345,682 - AZOBR_RS06350 0.51 -1.1
1,345,682 - AZOBR_RS06350 0.51 -1.4
1,345,682 - AZOBR_RS06350 0.51 -2.7
1,345,793 - AZOBR_RS06350 0.63 +0.4
1,345,981 + AZOBR_RS06350 0.83 +0.0
1,345,981 + AZOBR_RS06350 0.83 -0.4
1,345,981 + AZOBR_RS06350 0.83 +1.5
1,345,982 - AZOBR_RS06350 0.83 -0.4
1,345,982 - AZOBR_RS06350 0.83 -0.4
1,345,982 - AZOBR_RS06350 0.83 -0.3
1,346,056 + -0.8
1,346,057 - +0.5
1,346,057 - +1.4
1,346,118 + -0.0
1,346,326 + -0.9
1,346,515 + AZOBR_RS06355 0.21 +0.1
1,346,516 - AZOBR_RS06355 0.21 +0.9
1,346,764 + AZOBR_RS06355 0.42 -0.8
1,346,764 + AZOBR_RS06355 0.42 -0.2
1,346,764 + AZOBR_RS06355 0.42 +0.7
1,346,764 + AZOBR_RS06355 0.42 -1.0
1,346,765 - AZOBR_RS06355 0.42 +0.1
1,346,765 - AZOBR_RS06355 0.42 -2.0
1,346,765 - AZOBR_RS06355 0.42 +0.5
1,346,765 - AZOBR_RS06355 0.42 +1.3
1,346,974 + AZOBR_RS06355 0.60 -0.7

Or see this region's nucleotide sequence