Experiment: 3-octanone 6.3476 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS03125 and AZOBR_RS03130 are separated by 286 nucleotides AZOBR_RS03130 and AZOBR_RS03135 are separated by 260 nucleotides AZOBR_RS03135 and AZOBR_RS03140 are separated by 12 nucleotides
AZOBR_RS03125: AZOBR_RS03125 - FAD dependent oxidoreductase, at 666,305 to 667,417
_RS03125
AZOBR_RS03130: AZOBR_RS03130 - hypothetical protein, at 667,704 to 668,327
_RS03130
AZOBR_RS03135: AZOBR_RS03135 - orotidine 5'-phosphate decarboxylase, at 668,588 to 669,301
_RS03135
AZOBR_RS03140: AZOBR_RS03140 - N-(5'-phosphoribosyl)anthranilate isomerase, at 669,314 to 669,958
_RS03140
Position (kb) 667
668
669 Strain fitness (log2 ratio) -2
-1
0
1
2 at 666.974 kb on + strand, within AZOBR_RS03125 at 666.975 kb on - strand, within AZOBR_RS03125 at 667.055 kb on + strand, within AZOBR_RS03125 at 667.238 kb on + strand, within AZOBR_RS03125 at 667.238 kb on + strand, within AZOBR_RS03125 at 667.238 kb on + strand, within AZOBR_RS03125 at 667.239 kb on - strand, within AZOBR_RS03125 at 667.239 kb on - strand, within AZOBR_RS03125 at 667.548 kb on + strand at 667.548 kb on + strand at 667.548 kb on + strand at 667.548 kb on + strand at 667.548 kb on + strand at 667.548 kb on + strand at 667.731 kb on + strand at 667.731 kb on + strand at 667.732 kb on - strand at 668.128 kb on - strand, within AZOBR_RS03130 at 668.214 kb on - strand, within AZOBR_RS03130 at 668.539 kb on + strand at 668.868 kb on + strand, within AZOBR_RS03135 at 668.869 kb on - strand at 668.869 kb on - strand, within AZOBR_RS03135 at 668.869 kb on - strand at 669.299 kb on + strand at 669.299 kb on + strand at 669.299 kb on + strand at 669.299 kb on + strand at 669.300 kb on - strand at 669.313 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 6.3476 mM remove 666,974 + AZOBR_RS03125 0.60 -0.5 666,975 - AZOBR_RS03125 0.60 -2.0 667,055 + AZOBR_RS03125 0.67 +0.4 667,238 + AZOBR_RS03125 0.84 -2.2 667,238 + AZOBR_RS03125 0.84 -0.1 667,238 + AZOBR_RS03125 0.84 +0.8 667,239 - AZOBR_RS03125 0.84 +0.8 667,239 - AZOBR_RS03125 0.84 -0.2 667,548 + +0.7 667,548 + +1.0 667,548 + +0.4 667,548 + +0.1 667,548 + +0.5 667,548 + -0.5 667,731 + +0.1 667,731 + -0.4 667,732 - +1.3 668,128 - AZOBR_RS03130 0.68 -0.0 668,214 - AZOBR_RS03130 0.82 -0.7 668,539 + +0.1 668,868 + AZOBR_RS03135 0.39 +0.1 668,869 - +1.9 668,869 - AZOBR_RS03135 0.39 +1.9 668,869 - +1.9 669,299 + -2.0 669,299 + -1.0 669,299 + -1.1 669,299 + +0.8 669,300 - +1.9 669,313 + -2.2
Or see this region's nucleotide sequence