Experiment: 3-octanone 6.3476 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS03075 and AZOBR_RS03080 are separated by 141 nucleotides AZOBR_RS03080 and AZOBR_RS03085 are separated by 272 nucleotides AZOBR_RS03085 and AZOBR_RS03090 are separated by 87 nucleotides
AZOBR_RS03075: AZOBR_RS03075 - tRNA-Ala, at 656,690 to 656,765
_RS03075
AZOBR_RS03080: AZOBR_RS03080 - hypothetical protein, at 656,907 to 657,305
_RS03080
AZOBR_RS03085: AZOBR_RS03085 - gamma-glutamyltransferase, at 657,578 to 659,302
_RS03085
AZOBR_RS03090: AZOBR_RS03090 - 3-phosphoshikimate 1-carboxyvinyltransferase, at 659,390 to 660,727
_RS03090
Position (kb) 657
658
659
660 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 656.725 kb on - strand, within AZOBR_RS03075 at 657.248 kb on - strand, within AZOBR_RS03080 at 657.248 kb on - strand at 657.248 kb on - strand, within AZOBR_RS03080 at 657.251 kb on - strand, within AZOBR_RS03080 at 657.487 kb on - strand at 657.495 kb on - strand at 657.703 kb on + strand at 657.860 kb on + strand, within AZOBR_RS03085 at 657.968 kb on + strand, within AZOBR_RS03085 at 657.968 kb on + strand, within AZOBR_RS03085 at 657.968 kb on + strand, within AZOBR_RS03085 at 658.178 kb on + strand, within AZOBR_RS03085 at 658.178 kb on + strand, within AZOBR_RS03085 at 658.286 kb on + strand, within AZOBR_RS03085 at 658.412 kb on + strand, within AZOBR_RS03085 at 658.413 kb on - strand, within AZOBR_RS03085 at 658.421 kb on + strand, within AZOBR_RS03085 at 658.421 kb on + strand, within AZOBR_RS03085 at 658.421 kb on + strand, within AZOBR_RS03085 at 658.421 kb on + strand, within AZOBR_RS03085 at 658.422 kb on - strand, within AZOBR_RS03085 at 658.422 kb on - strand, within AZOBR_RS03085 at 658.422 kb on - strand, within AZOBR_RS03085 at 659.036 kb on + strand, within AZOBR_RS03085 at 659.037 kb on - strand, within AZOBR_RS03085 at 659.346 kb on + strand at 659.346 kb on + strand at 659.346 kb on + strand at 659.346 kb on + strand at 659.346 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 6.3476 mM remove 656,725 - AZOBR_RS03075 0.46 -0.9 657,248 - AZOBR_RS03080 0.85 -1.0 657,248 - +1.9 657,248 - AZOBR_RS03080 0.85 -0.9 657,251 - AZOBR_RS03080 0.86 -2.5 657,487 - -3.4 657,495 - -1.9 657,703 + +1.1 657,860 + AZOBR_RS03085 0.16 -0.7 657,968 + AZOBR_RS03085 0.23 -0.7 657,968 + AZOBR_RS03085 0.23 -2.2 657,968 + AZOBR_RS03085 0.23 +0.3 658,178 + AZOBR_RS03085 0.35 -0.5 658,178 + AZOBR_RS03085 0.35 +0.4 658,286 + AZOBR_RS03085 0.41 +3.5 658,412 + AZOBR_RS03085 0.48 -3.7 658,413 - AZOBR_RS03085 0.48 +0.6 658,421 + AZOBR_RS03085 0.49 -0.4 658,421 + AZOBR_RS03085 0.49 -0.5 658,421 + AZOBR_RS03085 0.49 +0.6 658,421 + AZOBR_RS03085 0.49 +0.3 658,422 - AZOBR_RS03085 0.49 +1.0 658,422 - AZOBR_RS03085 0.49 +0.4 658,422 - AZOBR_RS03085 0.49 -0.1 659,036 + AZOBR_RS03085 0.85 -0.5 659,037 - AZOBR_RS03085 0.85 +1.9 659,346 + +1.9 659,346 + -0.7 659,346 + -1.7 659,346 + -0.5 659,346 + -2.4
Or see this region's nucleotide sequence