Experiment: 3-octanone 6.3476 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS00095 and AZOBR_RS00100 are separated by 49 nucleotides AZOBR_RS00100 and AZOBR_RS00105 are separated by 442 nucleotides AZOBR_RS00105 and AZOBR_RS00110 are separated by 164 nucleotides AZOBR_RS00110 and AZOBR_RS00115 are separated by 350 nucleotides
AZOBR_RS00095: AZOBR_RS00095 - MFS transporter permease, at 8,298 to 9,482
_RS00095
AZOBR_RS00100: AZOBR_RS00100 - membrane protein, at 9,532 to 9,975
_RS00100
AZOBR_RS00105: AZOBR_RS00105 - ornithine decarboxylase, at 10,418 to 11,554
_RS00105
AZOBR_RS00110: AZOBR_RS00110 - hypothetical protein, at 11,719 to 11,898
_RS00110
AZOBR_RS00115: AZOBR_RS00115 - HAD hydrolase, at 12,249 to 12,935
_RS00115
Position (kb)
10
11
12 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 9.546 kb on - strand at 9.602 kb on + strand, within AZOBR_RS00100 at 9.603 kb on - strand, within AZOBR_RS00100 at 9.603 kb on - strand, within AZOBR_RS00100 at 9.603 kb on - strand, within AZOBR_RS00100 at 9.603 kb on - strand, within AZOBR_RS00100 at 9.798 kb on - strand, within AZOBR_RS00100 at 9.989 kb on - strand at 10.046 kb on + strand at 10.067 kb on + strand at 10.068 kb on - strand at 10.068 kb on - strand at 10.144 kb on + strand at 10.144 kb on + strand at 10.145 kb on - strand at 10.169 kb on + strand at 10.170 kb on - strand at 10.193 kb on + strand at 10.426 kb on + strand at 10.505 kb on + strand at 10.505 kb on + strand at 10.506 kb on - strand at 10.506 kb on - strand at 10.506 kb on - strand at 10.547 kb on + strand, within AZOBR_RS00105 at 11.105 kb on + strand, within AZOBR_RS00105 at 11.267 kb on + strand, within AZOBR_RS00105 at 11.324 kb on + strand, within AZOBR_RS00105 at 11.414 kb on + strand, within AZOBR_RS00105 at 11.414 kb on + strand, within AZOBR_RS00105 at 11.415 kb on - strand at 11.430 kb on - strand, within AZOBR_RS00105 at 11.501 kb on + strand at 11.501 kb on + strand at 11.502 kb on - strand at 11.502 kb on - strand at 11.721 kb on - strand at 11.876 kb on + strand, within AZOBR_RS00110 at 11.876 kb on + strand, within AZOBR_RS00110 at 11.876 kb on + strand, within AZOBR_RS00110 at 11.950 kb on - strand at 11.950 kb on - strand at 12.054 kb on + strand at 12.055 kb on - strand at 12.111 kb on - strand at 12.209 kb on - strand at 12.209 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 6.3476 mM remove 9,546 - -2.4 9,602 + AZOBR_RS00100 0.16 -1.6 9,603 - AZOBR_RS00100 0.16 -2.4 9,603 - AZOBR_RS00100 0.16 -1.1 9,603 - AZOBR_RS00100 0.16 +1.9 9,603 - AZOBR_RS00100 0.16 +1.9 9,798 - AZOBR_RS00100 0.60 -0.6 9,989 - -3.1 10,046 + +1.9 10,067 + +2.3 10,068 - -2.5 10,068 - +0.3 10,144 + -1.2 10,144 + -2.0 10,145 - +1.9 10,169 + -0.5 10,170 - +0.9 10,193 + +0.7 10,426 + +0.4 10,505 + -1.1 10,505 + -0.2 10,506 - -0.7 10,506 - +0.3 10,506 - +1.9 10,547 + AZOBR_RS00105 0.11 -0.0 11,105 + AZOBR_RS00105 0.60 +1.0 11,267 + AZOBR_RS00105 0.75 -0.0 11,324 + AZOBR_RS00105 0.80 -1.6 11,414 + AZOBR_RS00105 0.88 -0.2 11,414 + AZOBR_RS00105 0.88 +0.9 11,415 - +1.9 11,430 - AZOBR_RS00105 0.89 -1.1 11,501 + -0.4 11,501 + -0.2 11,502 - -0.1 11,502 - -0.1 11,721 - -0.1 11,876 + AZOBR_RS00110 0.87 -0.3 11,876 + AZOBR_RS00110 0.87 +1.2 11,876 + AZOBR_RS00110 0.87 -2.2 11,950 - +0.5 11,950 - +0.7 12,054 + +0.4 12,055 - +0.0 12,111 - +0.2 12,209 - -0.6 12,209 - +0.5
Or see this region's nucleotide sequence