Experiment: 3-octanone 6.3476 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS25635 and AZOBR_RS25645 are separated by 997 nucleotides AZOBR_RS25645 and AZOBR_RS25650 are separated by 82 nucleotides AZOBR_RS25650 and AZOBR_RS25655 are separated by 71 nucleotides
AZOBR_RS25635: AZOBR_RS25635 - high-affinity branched-chain amino acid ABC transporter (permease protein) (fragment), at 799,246 to 800,232
_RS25635
AZOBR_RS25645: AZOBR_RS25645 - amino acid ABC transporter substrate-binding protein, at 801,230 to 802,342
_RS25645
AZOBR_RS25650: AZOBR_RS25650 - hypothetical protein, at 802,425 to 802,889
_RS25650
AZOBR_RS25655: AZOBR_RS25655 - oxidoreductase, at 802,961 to 804,241
_RS25655
Position (kb) 801
802
803 Strain fitness (log2 ratio) -2
-1
0
1
2 at 800.508 kb on + strand at 800.508 kb on + strand at 800.509 kb on - strand at 800.509 kb on - strand at 800.598 kb on + strand at 800.598 kb on + strand at 800.598 kb on + strand at 800.599 kb on - strand at 800.599 kb on - strand at 800.668 kb on + strand at 800.767 kb on + strand at 800.767 kb on + strand at 801.043 kb on + strand at 801.043 kb on + strand at 801.044 kb on - strand at 801.118 kb on + strand at 801.119 kb on - strand at 801.119 kb on - strand at 801.119 kb on - strand at 801.160 kb on + strand at 801.160 kb on + strand at 801.160 kb on + strand at 801.160 kb on + strand at 801.161 kb on - strand at 801.161 kb on - strand at 801.163 kb on + strand at 801.163 kb on + strand at 801.163 kb on + strand at 801.163 kb on + strand at 801.164 kb on - strand at 801.164 kb on - strand at 801.164 kb on - strand at 801.613 kb on - strand, within AZOBR_RS25645 at 801.688 kb on - strand, within AZOBR_RS25645 at 801.688 kb on - strand, within AZOBR_RS25645 at 801.688 kb on - strand, within AZOBR_RS25645 at 801.735 kb on + strand, within AZOBR_RS25645 at 801.867 kb on + strand, within AZOBR_RS25645 at 801.868 kb on - strand, within AZOBR_RS25645 at 801.868 kb on - strand, within AZOBR_RS25645 at 801.897 kb on + strand, within AZOBR_RS25645 at 801.897 kb on + strand, within AZOBR_RS25645 at 801.898 kb on - strand, within AZOBR_RS25645 at 801.898 kb on - strand, within AZOBR_RS25645 at 801.898 kb on - strand, within AZOBR_RS25645 at 801.939 kb on + strand, within AZOBR_RS25645 at 801.939 kb on + strand, within AZOBR_RS25645 at 801.940 kb on - strand, within AZOBR_RS25645 at 801.940 kb on - strand, within AZOBR_RS25645 at 801.957 kb on + strand, within AZOBR_RS25645 at 801.957 kb on + strand, within AZOBR_RS25645 at 801.958 kb on - strand, within AZOBR_RS25645 at 802.008 kb on + strand, within AZOBR_RS25645 at 802.009 kb on - strand, within AZOBR_RS25645 at 802.009 kb on - strand, within AZOBR_RS25645 at 802.009 kb on - strand, within AZOBR_RS25645 at 802.218 kb on + strand, within AZOBR_RS25645 at 802.219 kb on - strand, within AZOBR_RS25645 at 802.219 kb on - strand, within AZOBR_RS25645 at 802.252 kb on - strand at 802.400 kb on - strand at 802.414 kb on + strand at 802.415 kb on - strand at 802.415 kb on - strand at 802.415 kb on - strand at 802.415 kb on - strand at 802.855 kb on + strand at 802.855 kb on + strand at 802.877 kb on - strand at 803.100 kb on + strand, within AZOBR_RS25655 at 803.100 kb on + strand, within AZOBR_RS25655 at 803.238 kb on + strand, within AZOBR_RS25655 at 803.238 kb on + strand, within AZOBR_RS25655 at 803.239 kb on - strand, within AZOBR_RS25655
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 6.3476 mM remove 800,508 + +0.1 800,508 + +0.1 800,509 - -1.0 800,509 - -0.8 800,598 + -0.6 800,598 + +1.2 800,598 + +0.0 800,599 - -0.2 800,599 - +0.0 800,668 + -0.9 800,767 + -0.0 800,767 + +0.3 801,043 + +0.2 801,043 + -0.2 801,044 - +0.4 801,118 + -0.2 801,119 - -0.1 801,119 - +0.2 801,119 - +0.9 801,160 + -0.1 801,160 + +0.4 801,160 + +0.0 801,160 + -0.1 801,161 - +0.1 801,161 - +0.6 801,163 + +0.3 801,163 + +0.8 801,163 + +0.5 801,163 + -0.4 801,164 - +0.4 801,164 - -0.2 801,164 - +0.4 801,613 - AZOBR_RS25645 0.34 +0.0 801,688 - AZOBR_RS25645 0.41 -0.8 801,688 - AZOBR_RS25645 0.41 -0.1 801,688 - AZOBR_RS25645 0.41 -0.7 801,735 + AZOBR_RS25645 0.45 +0.2 801,867 + AZOBR_RS25645 0.57 -0.2 801,868 - AZOBR_RS25645 0.57 +0.1 801,868 - AZOBR_RS25645 0.57 +0.7 801,897 + AZOBR_RS25645 0.60 -0.2 801,897 + AZOBR_RS25645 0.60 +0.4 801,898 - AZOBR_RS25645 0.60 -0.7 801,898 - AZOBR_RS25645 0.60 +0.9 801,898 - AZOBR_RS25645 0.60 +2.3 801,939 + AZOBR_RS25645 0.64 -0.2 801,939 + AZOBR_RS25645 0.64 -0.2 801,940 - AZOBR_RS25645 0.64 -0.2 801,940 - AZOBR_RS25645 0.64 -0.3 801,957 + AZOBR_RS25645 0.65 +0.6 801,957 + AZOBR_RS25645 0.65 +0.3 801,958 - AZOBR_RS25645 0.65 +0.1 802,008 + AZOBR_RS25645 0.70 -0.1 802,009 - AZOBR_RS25645 0.70 +0.1 802,009 - AZOBR_RS25645 0.70 -0.6 802,009 - AZOBR_RS25645 0.70 +0.4 802,218 + AZOBR_RS25645 0.89 +0.1 802,219 - AZOBR_RS25645 0.89 -2.3 802,219 - AZOBR_RS25645 0.89 -1.1 802,252 - +0.9 802,400 - -0.4 802,414 + -1.0 802,415 - -0.1 802,415 - -0.6 802,415 - +0.0 802,415 - -0.7 802,855 + +0.5 802,855 + -0.3 802,877 - -0.6 803,100 + AZOBR_RS25655 0.11 +0.5 803,100 + AZOBR_RS25655 0.11 -0.4 803,238 + AZOBR_RS25655 0.22 -0.0 803,238 + AZOBR_RS25655 0.22 -0.5 803,239 - AZOBR_RS25655 0.22 +0.0
Or see this region's nucleotide sequence