Experiment: 3-octanone 6.3476 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS09800 and AZOBR_RS09805 are separated by 6 nucleotides AZOBR_RS09805 and AZOBR_RS09810 overlap by 1 nucleotides AZOBR_RS09810 and AZOBR_RS09815 are separated by 163 nucleotides AZOBR_RS09815 and AZOBR_RS09820 are separated by 31 nucleotides
AZOBR_RS09800: AZOBR_RS09800 - hypothetical protein, at 2,056,152 to 2,056,484
_RS09800
AZOBR_RS09805: AZOBR_RS09805 - peptide chain release factor I, at 2,056,491 to 2,056,910
_RS09805
AZOBR_RS09810: AZOBR_RS09810 - DSBA oxidoreductase, at 2,056,910 to 2,057,563
_RS09810
AZOBR_RS09815: AZOBR_RS09815 - hypothetical protein, at 2,057,727 to 2,058,185
_RS09815
AZOBR_RS09820: AZOBR_RS09820 - hypothetical protein, at 2,058,217 to 2,058,609
_RS09820
Position (kb)
2056
2057
2058 Strain fitness (log2 ratio)
-1
0
1
2 at 2056.018 kb on + strand at 2056.019 kb on - strand at 2056.040 kb on + strand at 2056.046 kb on + strand at 2056.047 kb on - strand at 2056.047 kb on - strand at 2056.225 kb on - strand, within AZOBR_RS09800 at 2056.363 kb on - strand, within AZOBR_RS09800 at 2056.363 kb on - strand, within AZOBR_RS09800 at 2056.482 kb on + strand at 2056.483 kb on - strand at 2056.679 kb on - strand, within AZOBR_RS09805 at 2057.022 kb on + strand, within AZOBR_RS09810 at 2057.397 kb on + strand, within AZOBR_RS09810 at 2057.520 kb on + strand at 2057.520 kb on + strand at 2057.520 kb on + strand at 2057.520 kb on + strand at 2057.521 kb on - strand at 2057.521 kb on - strand at 2057.521 kb on - strand at 2057.564 kb on - strand at 2057.564 kb on - strand at 2057.572 kb on + strand at 2058.366 kb on - strand, within AZOBR_RS09820 at 2058.371 kb on + strand, within AZOBR_RS09820 at 2058.371 kb on + strand, within AZOBR_RS09820 at 2058.371 kb on + strand, within AZOBR_RS09820 at 2058.372 kb on - strand, within AZOBR_RS09820 at 2058.393 kb on - strand, within AZOBR_RS09820 at 2058.410 kb on + strand, within AZOBR_RS09820 at 2058.411 kb on - strand, within AZOBR_RS09820 at 2058.411 kb on - strand, within AZOBR_RS09820
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 6.3476 mM remove 2,056,018 + +1.0 2,056,019 - +1.7 2,056,040 + -0.4 2,056,046 + -0.1 2,056,047 - -0.1 2,056,047 - +1.0 2,056,225 - AZOBR_RS09800 0.22 +1.0 2,056,363 - AZOBR_RS09800 0.63 +0.2 2,056,363 - AZOBR_RS09800 0.63 +1.4 2,056,482 + +0.5 2,056,483 - -0.1 2,056,679 - AZOBR_RS09805 0.45 +1.1 2,057,022 + AZOBR_RS09810 0.17 +0.5 2,057,397 + AZOBR_RS09810 0.74 -0.4 2,057,520 + +0.6 2,057,520 + -0.7 2,057,520 + -0.0 2,057,520 + +0.5 2,057,521 - -0.7 2,057,521 - -1.0 2,057,521 - +0.5 2,057,564 - -0.5 2,057,564 - +0.1 2,057,572 + +0.5 2,058,366 - AZOBR_RS09820 0.38 -0.5 2,058,371 + AZOBR_RS09820 0.39 +2.0 2,058,371 + AZOBR_RS09820 0.39 +0.6 2,058,371 + AZOBR_RS09820 0.39 -0.4 2,058,372 - AZOBR_RS09820 0.39 -0.2 2,058,393 - AZOBR_RS09820 0.45 +0.1 2,058,410 + AZOBR_RS09820 0.49 -0.6 2,058,411 - AZOBR_RS09820 0.49 -0.2 2,058,411 - AZOBR_RS09820 0.49 -0.6
Or see this region's nucleotide sequence