Experiment: 3-octanone 5.2896 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS29130 and AZOBR_RS29140 are separated by 635 nucleotides AZOBR_RS29140 and AZOBR_RS29145 are separated by 68 nucleotides AZOBR_RS29145 and AZOBR_RS29150 are separated by 51 nucleotides
AZOBR_RS29130: AZOBR_RS29130 - multidrug ABC transporter ATPase, at 659,103 to 660,911
_RS29130
AZOBR_RS29140: AZOBR_RS29140 - hypothetical protein; putative signal peptide, at 661,547 to 661,732
_RS29140
AZOBR_RS29145: AZOBR_RS29145 - peptidase, at 661,801 to 662,877
_RS29145
AZOBR_RS29150: AZOBR_RS29150 - TonB-denpendent receptor, at 662,929 to 665,322
_RS29150
Position (kb) 661
662
663 Strain fitness (log2 ratio) -1
0
1
2 at 661.030 kb on + strand at 661.030 kb on + strand at 661.030 kb on + strand at 661.030 kb on + strand at 661.031 kb on - strand at 661.031 kb on - strand at 661.031 kb on - strand at 661.067 kb on - strand at 661.227 kb on + strand at 661.228 kb on - strand at 661.534 kb on + strand at 661.534 kb on + strand at 661.534 kb on + strand at 661.535 kb on - strand at 661.546 kb on - strand at 661.556 kb on - strand at 661.759 kb on + strand at 661.760 kb on - strand at 661.772 kb on - strand at 661.818 kb on - strand at 661.892 kb on + strand at 661.937 kb on + strand, within AZOBR_RS29145 at 661.937 kb on + strand, within AZOBR_RS29145 at 661.938 kb on - strand, within AZOBR_RS29145 at 661.938 kb on - strand, within AZOBR_RS29145 at 662.178 kb on - strand, within AZOBR_RS29145 at 662.216 kb on + strand, within AZOBR_RS29145 at 662.384 kb on + strand, within AZOBR_RS29145 at 662.384 kb on + strand, within AZOBR_RS29145 at 662.384 kb on + strand, within AZOBR_RS29145 at 662.385 kb on - strand, within AZOBR_RS29145 at 662.984 kb on + strand at 662.984 kb on + strand at 663.009 kb on - strand at 663.009 kb on - strand at 663.140 kb on + strand at 663.356 kb on + strand, within AZOBR_RS29150 at 663.357 kb on - strand, within AZOBR_RS29150 at 663.404 kb on + strand, within AZOBR_RS29150 at 663.405 kb on - strand, within AZOBR_RS29150 at 663.405 kb on - strand, within AZOBR_RS29150 at 663.506 kb on + strand, within AZOBR_RS29150 at 663.506 kb on + strand, within AZOBR_RS29150 at 663.603 kb on - strand, within AZOBR_RS29150 at 663.701 kb on + strand, within AZOBR_RS29150 at 663.785 kb on + strand, within AZOBR_RS29150
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 5.2896 mM remove 661,030 + +0.1 661,030 + +1.1 661,030 + +0.2 661,030 + -0.2 661,031 - -0.4 661,031 - -0.3 661,031 - +1.2 661,067 - +0.3 661,227 + +0.6 661,228 - -0.6 661,534 + +0.7 661,534 + -0.3 661,534 + +0.7 661,535 - +0.2 661,546 - -1.2 661,556 - -0.2 661,759 + +0.3 661,760 - -0.2 661,772 - -0.9 661,818 - -0.4 661,892 + +0.4 661,937 + AZOBR_RS29145 0.13 +0.7 661,937 + AZOBR_RS29145 0.13 +2.4 661,938 - AZOBR_RS29145 0.13 +0.9 661,938 - AZOBR_RS29145 0.13 +0.4 662,178 - AZOBR_RS29145 0.35 -0.7 662,216 + AZOBR_RS29145 0.39 +1.0 662,384 + AZOBR_RS29145 0.54 -0.3 662,384 + AZOBR_RS29145 0.54 -0.2 662,384 + AZOBR_RS29145 0.54 +0.9 662,385 - AZOBR_RS29145 0.54 -0.2 662,984 + +0.3 662,984 + +0.6 663,009 - +0.2 663,009 - -0.4 663,140 + +0.5 663,356 + AZOBR_RS29150 0.18 -0.9 663,357 - AZOBR_RS29150 0.18 +0.2 663,404 + AZOBR_RS29150 0.20 -0.5 663,405 - AZOBR_RS29150 0.20 +0.2 663,405 - AZOBR_RS29150 0.20 -0.4 663,506 + AZOBR_RS29150 0.24 +0.9 663,506 + AZOBR_RS29150 0.24 -0.4 663,603 - AZOBR_RS29150 0.28 +0.0 663,701 + AZOBR_RS29150 0.32 -0.2 663,785 + AZOBR_RS29150 0.36 +0.2
Or see this region's nucleotide sequence