Experiment: 3-octanone 5.2896 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS28095 and AZOBR_RS28100 are separated by 298 nucleotides
AZOBR_RS28095: AZOBR_RS28095 - transporter, at 474,576 to 475,436
_RS28095
AZOBR_RS28100: AZOBR_RS28100 - LysR family transcriptional regulator, at 475,735 to 476,625
_RS28100
Position (kb) 474
475
476 Strain fitness (log2 ratio) -2
-1
0
1
2 at 473.772 kb on + strand at 473.772 kb on + strand at 473.772 kb on + strand at 473.773 kb on - strand at 473.773 kb on - strand at 473.994 kb on + strand at 473.994 kb on + strand at 473.994 kb on + strand at 473.994 kb on + strand at 473.994 kb on + strand at 473.994 kb on + strand at 473.994 kb on + strand at 473.995 kb on - strand at 473.995 kb on - strand at 473.995 kb on - strand at 473.997 kb on + strand at 473.997 kb on + strand at 473.997 kb on + strand at 473.997 kb on + strand at 473.998 kb on - strand at 473.998 kb on - strand at 474.051 kb on + strand at 474.051 kb on + strand at 474.051 kb on + strand at 474.052 kb on - strand at 474.052 kb on - strand at 474.178 kb on - strand at 474.189 kb on + strand at 474.190 kb on - strand at 474.195 kb on + strand at 474.195 kb on + strand at 474.195 kb on + strand at 474.196 kb on - strand at 474.435 kb on + strand at 474.436 kb on - strand at 474.436 kb on - strand at 474.437 kb on + strand at 474.437 kb on + strand at 474.478 kb on + strand at 474.478 kb on + strand at 474.524 kb on + strand at 474.530 kb on + strand at 474.530 kb on + strand at 474.530 kb on + strand at 474.530 kb on + strand at 474.531 kb on - strand at 474.531 kb on - strand at 474.543 kb on - strand at 474.791 kb on - strand, within AZOBR_RS28095 at 474.791 kb on - strand, within AZOBR_RS28095 at 474.947 kb on - strand, within AZOBR_RS28095 at 475.517 kb on + strand at 475.518 kb on - strand at 475.535 kb on + strand at 475.536 kb on - strand at 475.536 kb on - strand at 475.541 kb on + strand at 475.542 kb on - strand at 475.642 kb on + strand at 475.965 kb on - strand, within AZOBR_RS28100 at 476.309 kb on + strand, within AZOBR_RS28100 at 476.310 kb on - strand, within AZOBR_RS28100 at 476.310 kb on - strand, within AZOBR_RS28100
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 5.2896 mM remove 473,772 + +0.3 473,772 + -0.5 473,772 + +0.5 473,773 - -0.1 473,773 - -0.2 473,994 + +0.2 473,994 + -0.4 473,994 + +0.6 473,994 + -0.8 473,994 + +0.1 473,994 + +1.0 473,994 + -0.6 473,995 - +0.8 473,995 - +0.6 473,995 - -0.6 473,997 + -2.2 473,997 + -1.1 473,997 + -1.0 473,997 + -0.3 473,998 - +0.5 473,998 - -0.7 474,051 + -0.2 474,051 + +0.6 474,051 + -0.3 474,052 - -0.6 474,052 - +0.3 474,178 - -0.1 474,189 + -0.6 474,190 - -0.8 474,195 + -0.1 474,195 + -1.1 474,195 + +0.1 474,196 - +0.7 474,435 + +2.2 474,436 - -1.3 474,436 - +0.0 474,437 + +0.1 474,437 + +0.6 474,478 + -0.8 474,478 + -1.1 474,524 + +1.0 474,530 + -0.2 474,530 + -0.0 474,530 + -0.6 474,530 + +0.4 474,531 - +0.4 474,531 - -0.1 474,543 - +0.3 474,791 - AZOBR_RS28095 0.25 +0.4 474,791 - AZOBR_RS28095 0.25 -0.9 474,947 - AZOBR_RS28095 0.43 -0.8 475,517 + -0.6 475,518 - -1.1 475,535 + +0.6 475,536 - +1.2 475,536 - -0.3 475,541 + -0.4 475,542 - +0.3 475,642 + +0.4 475,965 - AZOBR_RS28100 0.26 -0.4 476,309 + AZOBR_RS28100 0.64 -0.2 476,310 - AZOBR_RS28100 0.65 +1.2 476,310 - AZOBR_RS28100 0.65 +0.2
Or see this region's nucleotide sequence