Experiment: 3-octanone 5.2896 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS26595 and AZOBR_RS26600 overlap by 4 nucleotides AZOBR_RS26600 and AZOBR_RS26605 overlap by 4 nucleotides
AZOBR_RS26595: AZOBR_RS26595 - membrane protein, at 110,751 to 112,298
_RS26595
AZOBR_RS26600: AZOBR_RS26600 - membrane protein, at 112,295 to 112,585
_RS26600
AZOBR_RS26605: AZOBR_RS26605 - TonB-denpendent receptor, at 112,582 to 115,071
_RS26605
Position (kb) 112
113 Strain fitness (log2 ratio) -2
-1
0
1
2 at 111.407 kb on + strand, within AZOBR_RS26595 at 111.408 kb on - strand, within AZOBR_RS26595 at 111.667 kb on + strand, within AZOBR_RS26595 at 111.667 kb on + strand, within AZOBR_RS26595 at 111.667 kb on + strand, within AZOBR_RS26595 at 111.667 kb on + strand, within AZOBR_RS26595 at 111.668 kb on - strand, within AZOBR_RS26595 at 111.668 kb on - strand, within AZOBR_RS26595 at 111.668 kb on - strand, within AZOBR_RS26595 at 111.668 kb on - strand, within AZOBR_RS26595 at 111.716 kb on - strand, within AZOBR_RS26595 at 111.878 kb on - strand, within AZOBR_RS26595 at 111.919 kb on + strand, within AZOBR_RS26595 at 111.919 kb on + strand, within AZOBR_RS26595 at 111.919 kb on + strand, within AZOBR_RS26595 at 111.920 kb on - strand, within AZOBR_RS26595 at 111.923 kb on - strand, within AZOBR_RS26595 at 112.008 kb on + strand, within AZOBR_RS26595 at 112.008 kb on + strand, within AZOBR_RS26595 at 112.030 kb on + strand, within AZOBR_RS26595 at 112.030 kb on + strand, within AZOBR_RS26595 at 112.031 kb on - strand, within AZOBR_RS26595 at 112.195 kb on + strand at 112.195 kb on + strand at 112.196 kb on - strand at 112.196 kb on - strand at 112.298 kb on + strand at 112.298 kb on + strand at 112.593 kb on - strand at 112.593 kb on - strand at 112.629 kb on - strand at 112.629 kb on - strand at 112.631 kb on + strand at 112.632 kb on - strand at 112.632 kb on - strand at 112.664 kb on + strand at 112.664 kb on + strand at 112.664 kb on + strand at 112.665 kb on - strand at 112.730 kb on + strand at 112.731 kb on - strand at 112.731 kb on - strand at 112.805 kb on + strand at 112.805 kb on + strand at 112.806 kb on - strand at 112.821 kb on - strand at 112.874 kb on + strand, within AZOBR_RS26605 at 112.874 kb on + strand at 112.875 kb on - strand, within AZOBR_RS26605 at 112.875 kb on - strand, within AZOBR_RS26605 at 112.973 kb on + strand, within AZOBR_RS26605 at 112.974 kb on - strand, within AZOBR_RS26605 at 113.063 kb on + strand, within AZOBR_RS26605 at 113.064 kb on - strand, within AZOBR_RS26605 at 113.064 kb on - strand, within AZOBR_RS26605 at 113.064 kb on - strand, within AZOBR_RS26605 at 113.157 kb on - strand, within AZOBR_RS26605 at 113.175 kb on - strand, within AZOBR_RS26605 at 113.259 kb on - strand, within AZOBR_RS26605 at 113.285 kb on + strand, within AZOBR_RS26605 at 113.286 kb on - strand, within AZOBR_RS26605 at 113.433 kb on - strand, within AZOBR_RS26605
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 5.2896 mM remove 111,407 + AZOBR_RS26595 0.42 +0.1 111,408 - AZOBR_RS26595 0.42 +0.4 111,667 + AZOBR_RS26595 0.59 +0.8 111,667 + AZOBR_RS26595 0.59 +1.2 111,667 + AZOBR_RS26595 0.59 -0.9 111,667 + AZOBR_RS26595 0.59 -0.6 111,668 - AZOBR_RS26595 0.59 +0.4 111,668 - AZOBR_RS26595 0.59 -0.9 111,668 - AZOBR_RS26595 0.59 +0.0 111,668 - AZOBR_RS26595 0.59 -0.3 111,716 - AZOBR_RS26595 0.62 +0.3 111,878 - AZOBR_RS26595 0.73 +0.4 111,919 + AZOBR_RS26595 0.75 -0.3 111,919 + AZOBR_RS26595 0.75 -0.0 111,919 + AZOBR_RS26595 0.75 +0.3 111,920 - AZOBR_RS26595 0.76 +0.2 111,923 - AZOBR_RS26595 0.76 -0.8 112,008 + AZOBR_RS26595 0.81 +0.5 112,008 + AZOBR_RS26595 0.81 +0.1 112,030 + AZOBR_RS26595 0.83 +0.2 112,030 + AZOBR_RS26595 0.83 +0.0 112,031 - AZOBR_RS26595 0.83 +0.7 112,195 + -0.8 112,195 + -0.2 112,196 - +0.3 112,196 - -0.1 112,298 + -0.3 112,298 + -0.2 112,593 - +0.1 112,593 - -0.0 112,629 - +0.1 112,629 - -0.4 112,631 + +0.4 112,632 - -0.2 112,632 - -0.1 112,664 + +1.3 112,664 + +0.1 112,664 + +0.2 112,665 - +0.3 112,730 + -0.1 112,731 - -0.0 112,731 - +0.8 112,805 + -0.4 112,805 + -0.3 112,806 - +2.2 112,821 - +0.8 112,874 + AZOBR_RS26605 0.12 +0.1 112,874 + +1.4 112,875 - AZOBR_RS26605 0.12 -0.8 112,875 - AZOBR_RS26605 0.12 +1.4 112,973 + AZOBR_RS26605 0.16 -0.2 112,974 - AZOBR_RS26605 0.16 +0.4 113,063 + AZOBR_RS26605 0.19 -0.6 113,064 - AZOBR_RS26605 0.19 +0.1 113,064 - AZOBR_RS26605 0.19 -0.5 113,064 - AZOBR_RS26605 0.19 +0.0 113,157 - AZOBR_RS26605 0.23 +0.9 113,175 - AZOBR_RS26605 0.24 -0.5 113,259 - AZOBR_RS26605 0.27 -1.8 113,285 + AZOBR_RS26605 0.28 -0.3 113,286 - AZOBR_RS26605 0.28 -1.8 113,433 - AZOBR_RS26605 0.34 -1.0
Or see this region's nucleotide sequence