Experiment: 3-octanone 5.2896 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS22230 and AZOBR_RS22235 are separated by 122 nucleotides AZOBR_RS22235 and AZOBR_RS22240 are separated by 242 nucleotides AZOBR_RS22240 and AZOBR_RS22245 are separated by 260 nucleotides
AZOBR_RS22230: AZOBR_RS22230 - DNA topoisomerase IV subunit B, at 1,759,810 to 1,761,798
_RS22230
AZOBR_RS22235: AZOBR_RS22235 - acyl-CoA thioester hydrolase, at 1,761,921 to 1,762,337
_RS22235
AZOBR_RS22240: AZOBR_RS22240 - septation ring formation regulator EzrA, at 1,762,580 to 1,762,825
_RS22240
AZOBR_RS22245: AZOBR_RS22245 - pyruvate dehydrogenase E1 subunit alpha, at 1,763,086 to 1,764,102
_RS22245
Position (kb)
1761
1762
1763 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1761.809 kb on - strand at 1761.852 kb on + strand at 1761.852 kb on + strand at 1761.854 kb on + strand at 1761.854 kb on + strand at 1761.854 kb on + strand at 1761.855 kb on - strand at 1761.855 kb on - strand at 1761.855 kb on - strand at 1761.855 kb on - strand at 1761.856 kb on + strand at 1761.857 kb on - strand at 1762.149 kb on + strand, within AZOBR_RS22235 at 1762.149 kb on + strand, within AZOBR_RS22235 at 1762.287 kb on + strand, within AZOBR_RS22235 at 1762.403 kb on + strand at 1762.407 kb on - strand at 1763.007 kb on + strand at 1763.018 kb on + strand at 1763.018 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 5.2896 mM remove 1,761,809 - -1.2 1,761,852 + +1.0 1,761,852 + +0.2 1,761,854 + +0.3 1,761,854 + +1.0 1,761,854 + -0.1 1,761,855 - +0.5 1,761,855 - +0.5 1,761,855 - -0.1 1,761,855 - -1.1 1,761,856 + -2.0 1,761,857 - -0.7 1,762,149 + AZOBR_RS22235 0.55 +0.5 1,762,149 + AZOBR_RS22235 0.55 -2.6 1,762,287 + AZOBR_RS22235 0.88 +1.0 1,762,403 + -1.3 1,762,407 - -0.7 1,763,007 + +1.5 1,763,018 + +2.0 1,763,018 + +2.0
Or see this region's nucleotide sequence