Experiment: 3-octanone 5.2896 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS21050 and AZOBR_RS21055 are separated by 233 nucleotides AZOBR_RS21055 and AZOBR_RS21060 are separated by 46 nucleotides AZOBR_RS21060 and AZOBR_RS21065 are separated by 79 nucleotides
AZOBR_RS21050: AZOBR_RS21050 - nitrate ABC transporter ATP-binding protein, at 1,482,319 to 1,483,161
_RS21050
AZOBR_RS21055: AZOBR_RS21055 - GntR family transcriptional regulator, at 1,483,395 to 1,484,099
_RS21055
AZOBR_RS21060: AZOBR_RS21060 - membrane protein, at 1,484,146 to 1,484,544
_RS21060
AZOBR_RS21065: AZOBR_RS21065 - amidohydrolase, at 1,484,624 to 1,485,871
_RS21065
Position (kb) 1483
1484
1485 Strain fitness (log2 ratio) -1
0
1
2 at 1484.070 kb on - strand at 1484.089 kb on - strand at 1484.098 kb on - strand at 1484.098 kb on - strand at 1484.243 kb on + strand, within AZOBR_RS21060 at 1484.244 kb on - strand, within AZOBR_RS21060 at 1484.292 kb on - strand, within AZOBR_RS21060 at 1484.304 kb on - strand, within AZOBR_RS21060 at 1484.369 kb on + strand, within AZOBR_RS21060 at 1484.370 kb on - strand, within AZOBR_RS21060 at 1484.936 kb on + strand, within AZOBR_RS21065 at 1484.936 kb on + strand, within AZOBR_RS21065 at 1484.936 kb on + strand, within AZOBR_RS21065 at 1484.937 kb on - strand, within AZOBR_RS21065 at 1484.937 kb on - strand, within AZOBR_RS21065 at 1484.937 kb on - strand, within AZOBR_RS21065 at 1484.989 kb on + strand, within AZOBR_RS21065 at 1484.990 kb on - strand, within AZOBR_RS21065 at 1484.990 kb on - strand, within AZOBR_RS21065 at 1484.990 kb on - strand, within AZOBR_RS21065 at 1485.065 kb on + strand, within AZOBR_RS21065
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 5.2896 mM remove 1,484,070 - +2.0 1,484,089 - -1.2 1,484,098 - +0.1 1,484,098 - +0.0 1,484,243 + AZOBR_RS21060 0.24 +1.0 1,484,244 - AZOBR_RS21060 0.25 +0.4 1,484,292 - AZOBR_RS21060 0.37 -1.0 1,484,304 - AZOBR_RS21060 0.40 +0.2 1,484,369 + AZOBR_RS21060 0.56 -0.0 1,484,370 - AZOBR_RS21060 0.56 +0.3 1,484,936 + AZOBR_RS21065 0.25 +0.3 1,484,936 + AZOBR_RS21065 0.25 -1.6 1,484,936 + AZOBR_RS21065 0.25 -0.5 1,484,937 - AZOBR_RS21065 0.25 -0.3 1,484,937 - AZOBR_RS21065 0.25 +0.4 1,484,937 - AZOBR_RS21065 0.25 +0.7 1,484,989 + AZOBR_RS21065 0.29 -0.4 1,484,990 - AZOBR_RS21065 0.29 -0.2 1,484,990 - AZOBR_RS21065 0.29 -0.2 1,484,990 - AZOBR_RS21065 0.29 -0.8 1,485,065 + AZOBR_RS21065 0.35 -0.2
Or see this region's nucleotide sequence