Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS07235

Experiment: 3-octanone 5.2896 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAZOBR_RS07230 and AZOBR_RS07235 are separated by 30 nucleotidesAZOBR_RS07235 and AZOBR_RS07245 are separated by 828 nucleotides AZOBR_RS07230: AZOBR_RS07230 - NADH:ubiquinone oxidoreductase subunit N, at 1,525,766 to 1,527,214 _RS07230 AZOBR_RS07235: AZOBR_RS07235 - biotin, at 1,527,245 to 1,528,006 _RS07235 AZOBR_RS07245: AZOBR_RS07245 - RNA-metabolising metallo-beta-lactamase, at 1,528,835 to 1,530,499 _RS07245 Position (kb) 1527 1528 1529Strain fitness (log2 ratio) -1 0 1at 1528.862 kb on + strandat 1528.862 kb on + strandat 1528.863 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 3-octanone 5.2896 mM
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1,528,862 + -0.8
1,528,862 + -1.3
1,528,863 - -0.1

Or see this region's nucleotide sequence