Experiment: 3-octanone 5.2896 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS01710 and AZOBR_RS01715 are separated by 242 nucleotides AZOBR_RS01715 and AZOBR_RS01720 are separated by 217 nucleotides AZOBR_RS01720 and AZOBR_RS01725 are separated by 140 nucleotides
AZOBR_RS01710: AZOBR_RS01710 - translocase, at 348,824 to 349,498
_RS01710
AZOBR_RS01715: AZOBR_RS01715 - exlusion protein FxsA, at 349,741 to 350,241
_RS01715
AZOBR_RS01720: AZOBR_RS01720 - preprotein translocase subunit SecB, at 350,459 to 350,956
_RS01720
AZOBR_RS01725: AZOBR_RS01725 - transcription termination factor Rho, at 351,097 to 352,353
_RS01725
Position (kb) 350
351 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 349.559 kb on + strand at 349.559 kb on + strand at 349.585 kb on + strand at 349.585 kb on + strand at 349.585 kb on + strand at 349.586 kb on - strand at 349.586 kb on - strand at 349.586 kb on - strand at 349.586 kb on - strand at 349.704 kb on + strand at 349.705 kb on - strand at 349.705 kb on - strand at 349.705 kb on - strand at 349.708 kb on + strand at 350.082 kb on + strand, within AZOBR_RS01715 at 350.083 kb on - strand, within AZOBR_RS01715 at 350.083 kb on - strand, within AZOBR_RS01715 at 350.222 kb on - strand at 350.399 kb on + strand at 350.400 kb on - strand at 350.531 kb on + strand, within AZOBR_RS01720 at 350.531 kb on + strand, within AZOBR_RS01720 at 350.532 kb on - strand, within AZOBR_RS01720 at 350.651 kb on + strand, within AZOBR_RS01720 at 350.651 kb on + strand, within AZOBR_RS01720 at 350.652 kb on - strand, within AZOBR_RS01720 at 350.724 kb on - strand, within AZOBR_RS01720 at 351.099 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 5.2896 mM remove 349,559 + -1.1 349,559 + -0.3 349,585 + -2.6 349,585 + -0.6 349,585 + -1.7 349,586 - -2.9 349,586 - -0.1 349,586 - -0.4 349,586 - -0.5 349,704 + -1.0 349,705 - -1.1 349,705 - +1.4 349,705 - -1.0 349,708 + -1.0 350,082 + AZOBR_RS01715 0.68 -2.9 350,083 - AZOBR_RS01715 0.68 -0.9 350,083 - AZOBR_RS01715 0.68 -1.4 350,222 - -0.8 350,399 + -0.2 350,400 - -1.7 350,531 + AZOBR_RS01720 0.14 -0.8 350,531 + AZOBR_RS01720 0.14 -0.6 350,532 - AZOBR_RS01720 0.15 -0.6 350,651 + AZOBR_RS01720 0.39 -0.2 350,651 + AZOBR_RS01720 0.39 +2.3 350,652 - AZOBR_RS01720 0.39 -0.2 350,724 - AZOBR_RS01720 0.53 +0.4 351,099 - +0.7
Or see this region's nucleotide sequence