Experiment: 3-octanone 5.2896 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS29150 and AZOBR_RS29155 are separated by 239 nucleotides AZOBR_RS29155 and AZOBR_RS29160 are separated by 149 nucleotides
AZOBR_RS29150: AZOBR_RS29150 - TonB-denpendent receptor, at 662,929 to 665,322
_RS29150
AZOBR_RS29155: AZOBR_RS29155 - hypothetical protein, at 665,562 to 666,539
_RS29155
AZOBR_RS29160: AZOBR_RS29160 - putative RNA polymerase sigma-70 factor ECF subfamily, at 666,689 to 667,213
_RS29160
Position (kb) 665
666
667 Strain fitness (log2 ratio) -2
-1
0
1
2 at 664.682 kb on + strand, within AZOBR_RS29150 at 664.682 kb on + strand, within AZOBR_RS29150 at 664.844 kb on + strand, within AZOBR_RS29150 at 664.845 kb on - strand, within AZOBR_RS29150 at 665.582 kb on - strand at 665.582 kb on - strand at 665.582 kb on - strand at 665.670 kb on + strand, within AZOBR_RS29155 at 665.670 kb on + strand, within AZOBR_RS29155 at 666.275 kb on + strand, within AZOBR_RS29155 at 666.276 kb on - strand, within AZOBR_RS29155 at 666.276 kb on - strand, within AZOBR_RS29155 at 666.626 kb on + strand at 666.712 kb on + strand at 666.712 kb on + strand at 666.712 kb on + strand at 666.713 kb on - strand at 666.713 kb on - strand at 666.750 kb on + strand, within AZOBR_RS29160 at 666.750 kb on + strand, within AZOBR_RS29160 at 666.750 kb on + strand, within AZOBR_RS29160 at 666.751 kb on - strand, within AZOBR_RS29160 at 666.751 kb on - strand, within AZOBR_RS29160 at 666.819 kb on + strand, within AZOBR_RS29160 at 666.819 kb on + strand, within AZOBR_RS29160 at 666.819 kb on + strand, within AZOBR_RS29160 at 666.820 kb on - strand, within AZOBR_RS29160 at 666.820 kb on - strand, within AZOBR_RS29160 at 667.020 kb on + strand, within AZOBR_RS29160 at 667.020 kb on + strand, within AZOBR_RS29160 at 667.020 kb on + strand, within AZOBR_RS29160 at 667.020 kb on + strand, within AZOBR_RS29160 at 667.021 kb on - strand, within AZOBR_RS29160 at 667.021 kb on - strand, within AZOBR_RS29160 at 667.021 kb on - strand, within AZOBR_RS29160 at 667.021 kb on - strand, within AZOBR_RS29160 at 667.021 kb on - strand, within AZOBR_RS29160 at 667.021 kb on - strand, within AZOBR_RS29160 at 667.021 kb on - strand, within AZOBR_RS29160 at 667.377 kb on + strand at 667.396 kb on + strand at 667.454 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 5.2896 mM remove 664,682 + AZOBR_RS29150 0.73 -0.0 664,682 + AZOBR_RS29150 0.73 +1.6 664,844 + AZOBR_RS29150 0.80 -0.2 664,845 - AZOBR_RS29150 0.80 +0.3 665,582 - +1.2 665,582 - -1.2 665,582 - +0.4 665,670 + AZOBR_RS29155 0.11 -0.1 665,670 + AZOBR_RS29155 0.11 +0.2 666,275 + AZOBR_RS29155 0.73 -2.6 666,276 - AZOBR_RS29155 0.73 -2.1 666,276 - AZOBR_RS29155 0.73 -1.0 666,626 + +1.0 666,712 + -0.0 666,712 + +0.1 666,712 + +0.7 666,713 - -1.4 666,713 - +0.1 666,750 + AZOBR_RS29160 0.12 -0.1 666,750 + AZOBR_RS29160 0.12 -0.8 666,750 + AZOBR_RS29160 0.12 +0.9 666,751 - AZOBR_RS29160 0.12 -0.5 666,751 - AZOBR_RS29160 0.12 -1.2 666,819 + AZOBR_RS29160 0.25 -0.1 666,819 + AZOBR_RS29160 0.25 -0.6 666,819 + AZOBR_RS29160 0.25 +0.6 666,820 - AZOBR_RS29160 0.25 +0.0 666,820 - AZOBR_RS29160 0.25 +0.3 667,020 + AZOBR_RS29160 0.63 +1.3 667,020 + AZOBR_RS29160 0.63 -0.3 667,020 + AZOBR_RS29160 0.63 -0.3 667,020 + AZOBR_RS29160 0.63 -0.7 667,021 - AZOBR_RS29160 0.63 -0.6 667,021 - AZOBR_RS29160 0.63 -0.2 667,021 - AZOBR_RS29160 0.63 +0.3 667,021 - AZOBR_RS29160 0.63 -1.4 667,021 - AZOBR_RS29160 0.63 +0.0 667,021 - AZOBR_RS29160 0.63 -1.3 667,021 - AZOBR_RS29160 0.63 -0.2 667,377 + +2.0 667,396 + +0.0 667,454 + +0.4
Or see this region's nucleotide sequence