Experiment: 3-octanone 5.2896 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS17195 and AZOBR_RS17200 are separated by 542 nucleotides AZOBR_RS17200 and AZOBR_RS17205 overlap by 23 nucleotides AZOBR_RS17205 and AZOBR_RS17210 are separated by 354 nucleotides
AZOBR_RS17195: AZOBR_RS17195 - hypothetical protein, at 608,847 to 609,125
_RS17195
AZOBR_RS17200: AZOBR_RS17200 - putative histidine kinase, at 609,668 to 610,522
_RS17200
AZOBR_RS17205: AZOBR_RS17205 - regulator, at 610,500 to 610,895
_RS17205
AZOBR_RS17210: AZOBR_RS17210 - epimerase, at 611,250 to 612,182
_RS17210
Position (kb) 609
610
611 Strain fitness (log2 ratio) -1
0
1
2 at 609.163 kb on + strand at 609.164 kb on - strand at 609.164 kb on - strand at 609.164 kb on - strand at 609.223 kb on + strand at 609.223 kb on + strand at 609.223 kb on + strand at 609.224 kb on - strand at 609.284 kb on - strand at 609.284 kb on - strand at 609.887 kb on + strand, within AZOBR_RS17200 at 609.887 kb on + strand, within AZOBR_RS17200 at 609.887 kb on + strand, within AZOBR_RS17200 at 609.888 kb on - strand, within AZOBR_RS17200 at 609.888 kb on - strand, within AZOBR_RS17200 at 609.888 kb on - strand, within AZOBR_RS17200 at 609.888 kb on - strand, within AZOBR_RS17200 at 610.241 kb on + strand, within AZOBR_RS17200 at 610.241 kb on + strand, within AZOBR_RS17200 at 610.242 kb on - strand, within AZOBR_RS17200 at 610.242 kb on - strand, within AZOBR_RS17200 at 610.365 kb on + strand, within AZOBR_RS17200 at 610.365 kb on + strand, within AZOBR_RS17200 at 610.365 kb on + strand, within AZOBR_RS17200 at 610.366 kb on - strand, within AZOBR_RS17200 at 610.367 kb on + strand, within AZOBR_RS17200 at 610.367 kb on + strand, within AZOBR_RS17200 at 610.368 kb on - strand, within AZOBR_RS17200 at 610.368 kb on - strand, within AZOBR_RS17200 at 610.815 kb on + strand, within AZOBR_RS17205 at 610.815 kb on + strand, within AZOBR_RS17205 at 610.815 kb on + strand, within AZOBR_RS17205 at 610.816 kb on - strand, within AZOBR_RS17205 at 611.031 kb on + strand at 611.176 kb on + strand at 611.176 kb on + strand at 611.213 kb on - strand at 611.213 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 5.2896 mM remove 609,163 + -0.1 609,164 - +1.9 609,164 - -0.4 609,164 - -0.0 609,223 + +0.6 609,223 + -0.2 609,223 + +0.4 609,224 - -1.2 609,284 - -0.5 609,284 - -1.0 609,887 + AZOBR_RS17200 0.26 +1.0 609,887 + AZOBR_RS17200 0.26 -0.6 609,887 + AZOBR_RS17200 0.26 -0.1 609,888 - AZOBR_RS17200 0.26 -0.3 609,888 - AZOBR_RS17200 0.26 +0.0 609,888 - AZOBR_RS17200 0.26 +1.0 609,888 - AZOBR_RS17200 0.26 -0.1 610,241 + AZOBR_RS17200 0.67 -0.3 610,241 + AZOBR_RS17200 0.67 -0.0 610,242 - AZOBR_RS17200 0.67 -0.3 610,242 - AZOBR_RS17200 0.67 +1.0 610,365 + AZOBR_RS17200 0.82 -0.7 610,365 + AZOBR_RS17200 0.82 +1.0 610,365 + AZOBR_RS17200 0.82 +0.4 610,366 - AZOBR_RS17200 0.82 +0.4 610,367 + AZOBR_RS17200 0.82 -1.5 610,367 + AZOBR_RS17200 0.82 +0.0 610,368 - AZOBR_RS17200 0.82 -0.4 610,368 - AZOBR_RS17200 0.82 +0.6 610,815 + AZOBR_RS17205 0.80 +0.3 610,815 + AZOBR_RS17205 0.80 -0.4 610,815 + AZOBR_RS17205 0.80 -0.6 610,816 - AZOBR_RS17205 0.80 -0.2 611,031 + -0.6 611,176 + -0.7 611,176 + +0.6 611,213 - +0.8 611,213 - -1.0
Or see this region's nucleotide sequence