Experiment: 3-octanone 5.2896 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS08480 and AZOBR_RS08485 are separated by 94 nucleotides AZOBR_RS08485 and AZOBR_RS08490 are separated by 160 nucleotides AZOBR_RS08490 and AZOBR_RS08500 are separated by 987 nucleotides
AZOBR_RS08480: AZOBR_RS08480 - ABC transporter permease, at 1,779,951 to 1,781,165
_RS08480
AZOBR_RS08485: AZOBR_RS08485 - hypothetical protein, at 1,781,260 to 1,781,493
_RS08485
AZOBR_RS08490: AZOBR_RS08490 - hypothetical protein, at 1,781,654 to 1,781,872
_RS08490
AZOBR_RS08500: AZOBR_RS08500 - ABC transporter permease, at 1,782,860 to 1,783,843
_RS08500
Position (kb)
1781
1782 Strain fitness (log2 ratio)
-1
0
1
2 at 1780.794 kb on + strand, within AZOBR_RS08480 at 1780.794 kb on + strand, within AZOBR_RS08480 at 1780.795 kb on - strand, within AZOBR_RS08480 at 1780.837 kb on - strand, within AZOBR_RS08480 at 1780.837 kb on - strand, within AZOBR_RS08480 at 1780.854 kb on - strand, within AZOBR_RS08480 at 1780.884 kb on + strand, within AZOBR_RS08480 at 1780.885 kb on - strand, within AZOBR_RS08480 at 1780.885 kb on - strand, within AZOBR_RS08480 at 1780.902 kb on + strand, within AZOBR_RS08480 at 1780.902 kb on + strand, within AZOBR_RS08480 at 1780.903 kb on - strand, within AZOBR_RS08480 at 1781.038 kb on - strand, within AZOBR_RS08480 at 1781.038 kb on - strand, within AZOBR_RS08480 at 1781.038 kb on - strand, within AZOBR_RS08480 at 1781.038 kb on - strand, within AZOBR_RS08480 at 1781.038 kb on - strand, within AZOBR_RS08480 at 1781.410 kb on + strand, within AZOBR_RS08485 at 1782.042 kb on + strand at 1782.117 kb on + strand at 1782.117 kb on + strand at 1782.117 kb on + strand at 1782.253 kb on - strand at 1782.330 kb on + strand at 1782.330 kb on + strand at 1782.331 kb on - strand at 1782.627 kb on - strand at 1782.627 kb on - strand at 1782.627 kb on - strand at 1782.729 kb on - strand at 1782.768 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 5.2896 mM remove 1,780,794 + AZOBR_RS08480 0.69 +0.3 1,780,794 + AZOBR_RS08480 0.69 -1.2 1,780,795 - AZOBR_RS08480 0.69 +0.5 1,780,837 - AZOBR_RS08480 0.73 -1.0 1,780,837 - AZOBR_RS08480 0.73 +0.5 1,780,854 - AZOBR_RS08480 0.74 +0.2 1,780,884 + AZOBR_RS08480 0.77 -0.4 1,780,885 - AZOBR_RS08480 0.77 +1.2 1,780,885 - AZOBR_RS08480 0.77 -0.2 1,780,902 + AZOBR_RS08480 0.78 +0.2 1,780,902 + AZOBR_RS08480 0.78 +0.1 1,780,903 - AZOBR_RS08480 0.78 +0.9 1,781,038 - AZOBR_RS08480 0.89 +0.6 1,781,038 - AZOBR_RS08480 0.89 -0.6 1,781,038 - AZOBR_RS08480 0.89 -0.1 1,781,038 - AZOBR_RS08480 0.89 +1.5 1,781,038 - AZOBR_RS08480 0.89 -1.6 1,781,410 + AZOBR_RS08485 0.64 +2.0 1,782,042 + -0.2 1,782,117 + -0.4 1,782,117 + +2.3 1,782,117 + -0.9 1,782,253 - -0.1 1,782,330 + +0.0 1,782,330 + -0.6 1,782,331 - +2.5 1,782,627 - +0.9 1,782,627 - -0.4 1,782,627 - -0.6 1,782,729 - +1.0 1,782,768 - +1.0
Or see this region's nucleotide sequence