Experiment: 3-octanone 5.2896 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS06555 and AZOBR_RS06560 are separated by 304 nucleotides AZOBR_RS06560 and AZOBR_RS06565 are separated by 50 nucleotides AZOBR_RS06565 and AZOBR_RS06570 are separated by 175 nucleotides
AZOBR_RS06555: AZOBR_RS06555 - Branched-chain-amino-acid transaminase (EC 2.6.1.42) <small>(from data)</small>, at 1,387,614 to 1,388,828
_RS06555
AZOBR_RS06560: AZOBR_RS06560 - acetolactate synthase, at 1,389,133 to 1,390,896
_RS06560
AZOBR_RS06565: AZOBR_RS06565 - acetolactate synthase, at 1,390,947 to 1,391,453
_RS06565
AZOBR_RS06570: AZOBR_RS06570 - ketol-acid reductoisomerase, at 1,391,629 to 1,392,648
_RS06570
Position (kb) 1389
1390
1391 Strain fitness (log2 ratio) -2
-1
0
1
2 at 1388.241 kb on + strand, within AZOBR_RS06555 at 1388.257 kb on - strand, within AZOBR_RS06555 at 1388.827 kb on - strand at 1389.132 kb on + strand at 1389.133 kb on - strand at 1389.133 kb on - strand at 1389.194 kb on + strand at 1389.577 kb on + strand, within AZOBR_RS06560 at 1389.652 kb on + strand, within AZOBR_RS06560 at 1389.766 kb on + strand, within AZOBR_RS06560 at 1389.928 kb on + strand at 1389.929 kb on - strand, within AZOBR_RS06560 at 1390.310 kb on - strand, within AZOBR_RS06560 at 1390.531 kb on + strand, within AZOBR_RS06560 at 1390.570 kb on + strand, within AZOBR_RS06560 at 1390.571 kb on - strand, within AZOBR_RS06560 at 1390.571 kb on - strand, within AZOBR_RS06560 at 1390.939 kb on + strand at 1390.940 kb on - strand at 1390.940 kb on - strand at 1391.044 kb on - strand, within AZOBR_RS06565 at 1391.475 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 5.2896 mM remove 1,388,241 + AZOBR_RS06555 0.52 -0.6 1,388,257 - AZOBR_RS06555 0.53 -0.8 1,388,827 - +0.5 1,389,132 + +0.9 1,389,133 - -0.4 1,389,133 - +0.9 1,389,194 + +0.3 1,389,577 + AZOBR_RS06560 0.25 -1.6 1,389,652 + AZOBR_RS06560 0.29 +0.9 1,389,766 + AZOBR_RS06560 0.36 -0.4 1,389,928 + -0.9 1,389,929 - AZOBR_RS06560 0.45 -0.4 1,390,310 - AZOBR_RS06560 0.67 +0.9 1,390,531 + AZOBR_RS06560 0.79 -2.6 1,390,570 + AZOBR_RS06560 0.81 -0.6 1,390,571 - AZOBR_RS06560 0.82 +1.9 1,390,571 - AZOBR_RS06560 0.82 +1.9 1,390,939 + +0.3 1,390,940 - +0.1 1,390,940 - -0.7 1,391,044 - AZOBR_RS06565 0.19 -1.4 1,391,475 + +0.2
Or see this region's nucleotide sequence