Experiment: 3-octanone 5.2896 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS22710 and AZOBR_RS22715 are separated by 107 nucleotides AZOBR_RS22715 and AZOBR_RS22720 are separated by 18 nucleotides
AZOBR_RS22710: AZOBR_RS22710 - gluconolactonase, at 104,285 to 105,175
_RS22710
AZOBR_RS22715: AZOBR_RS22715 - C4-dicarboxylate ABC transporter permease, at 105,283 to 106,743
_RS22715
AZOBR_RS22720: AZOBR_RS22720 - hypothetical protein, at 106,762 to 107,220
_RS22720
Position (kb)
105
106
107 Strain fitness (log2 ratio)
-1
0
1 at 104.634 kb on + strand, within AZOBR_RS22710 at 104.635 kb on - strand, within AZOBR_RS22710 at 104.682 kb on + strand, within AZOBR_RS22710 at 104.683 kb on - strand, within AZOBR_RS22710 at 104.730 kb on + strand, within AZOBR_RS22710 at 105.282 kb on - strand at 105.350 kb on + strand at 105.452 kb on + strand, within AZOBR_RS22715 at 105.533 kb on + strand, within AZOBR_RS22715 at 105.909 kb on - strand, within AZOBR_RS22715 at 106.040 kb on + strand, within AZOBR_RS22715 at 106.041 kb on - strand, within AZOBR_RS22715 at 106.739 kb on + strand at 106.740 kb on - strand at 106.740 kb on - strand at 106.764 kb on - strand at 106.818 kb on - strand, within AZOBR_RS22720 at 106.833 kb on - strand, within AZOBR_RS22720 at 106.833 kb on - strand, within AZOBR_RS22720 at 106.958 kb on + strand, within AZOBR_RS22720 at 106.958 kb on + strand, within AZOBR_RS22720 at 106.959 kb on - strand, within AZOBR_RS22720 at 106.959 kb on - strand, within AZOBR_RS22720 at 106.959 kb on - strand, within AZOBR_RS22720 at 106.964 kb on + strand, within AZOBR_RS22720 at 106.964 kb on + strand, within AZOBR_RS22720 at 106.965 kb on - strand, within AZOBR_RS22720 at 106.965 kb on - strand, within AZOBR_RS22720 at 107.117 kb on + strand, within AZOBR_RS22720 at 107.117 kb on + strand, within AZOBR_RS22720 at 107.436 kb on + strand at 107.518 kb on + strand at 107.571 kb on + strand at 107.571 kb on + strand at 107.571 kb on + strand at 107.572 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 5.2896 mM remove 104,634 + AZOBR_RS22710 0.39 -0.3 104,635 - AZOBR_RS22710 0.39 -0.4 104,682 + AZOBR_RS22710 0.45 +0.5 104,683 - AZOBR_RS22710 0.45 +0.8 104,730 + AZOBR_RS22710 0.50 -0.6 105,282 - +0.1 105,350 + +1.0 105,452 + AZOBR_RS22715 0.12 +1.0 105,533 + AZOBR_RS22715 0.17 +0.8 105,909 - AZOBR_RS22715 0.43 +0.4 106,040 + AZOBR_RS22715 0.52 -0.6 106,041 - AZOBR_RS22715 0.52 +0.2 106,739 + +0.5 106,740 - +1.5 106,740 - -0.2 106,764 - -0.3 106,818 - AZOBR_RS22720 0.12 -0.3 106,833 - AZOBR_RS22720 0.15 +0.3 106,833 - AZOBR_RS22720 0.15 +0.3 106,958 + AZOBR_RS22720 0.43 +1.7 106,958 + AZOBR_RS22720 0.43 +0.2 106,959 - AZOBR_RS22720 0.43 -0.2 106,959 - AZOBR_RS22720 0.43 -0.1 106,959 - AZOBR_RS22720 0.43 -1.5 106,964 + AZOBR_RS22720 0.44 -0.6 106,964 + AZOBR_RS22720 0.44 +0.1 106,965 - AZOBR_RS22720 0.44 -0.4 106,965 - AZOBR_RS22720 0.44 +0.8 107,117 + AZOBR_RS22720 0.77 -0.2 107,117 + AZOBR_RS22720 0.77 +0.1 107,436 + -0.1 107,518 + -0.5 107,571 + +0.8 107,571 + -1.5 107,571 + -0.1 107,572 - +0.2
Or see this region's nucleotide sequence