Experiment: 3-octanone 5.2896 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS12260 and AZOBR_RS12265 overlap by 4 nucleotides AZOBR_RS12265 and AZOBR_RS12270 are separated by 7 nucleotides AZOBR_RS12270 and AZOBR_RS00040 are separated by 103 nucleotides
AZOBR_RS12260: AZOBR_RS12260 - elongation factor 3, at 2,575,114 to 2,576,940
_RS12260
AZOBR_RS12265: AZOBR_RS12265 - DMT transporter permease, at 2,576,937 to 2,577,815
_RS12265
AZOBR_RS12270: AZOBR_RS12270 - N-acetylmuramoyl-L-alanine amidase, at 2,577,823 to 2,578,533
_RS12270
AZOBR_RS00040: AZOBR_RS00040 - RNaseP_bact_a, at 2,578,637 to 2,578,982
_RS00040
Position (kb)
2577
2578
2579 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2577.564 kb on + strand, within AZOBR_RS12265 at 2577.564 kb on + strand, within AZOBR_RS12265 at 2577.564 kb on + strand, within AZOBR_RS12265 at 2577.565 kb on - strand, within AZOBR_RS12265 at 2577.565 kb on - strand, within AZOBR_RS12265 at 2577.565 kb on - strand, within AZOBR_RS12265 at 2577.565 kb on - strand, within AZOBR_RS12265 at 2577.565 kb on - strand, within AZOBR_RS12265 at 2577.594 kb on + strand, within AZOBR_RS12265 at 2577.594 kb on + strand, within AZOBR_RS12265 at 2577.894 kb on - strand, within AZOBR_RS12270 at 2577.916 kb on + strand, within AZOBR_RS12270 at 2577.916 kb on + strand, within AZOBR_RS12270 at 2577.916 kb on + strand, within AZOBR_RS12270 at 2577.917 kb on - strand, within AZOBR_RS12270 at 2578.015 kb on + strand, within AZOBR_RS12270 at 2578.399 kb on + strand, within AZOBR_RS12270 at 2579.106 kb on + strand at 2579.168 kb on + strand at 2579.169 kb on - strand at 2579.170 kb on + strand at 2579.283 kb on + strand at 2579.294 kb on + strand at 2579.294 kb on + strand at 2579.294 kb on + strand at 2579.294 kb on + strand at 2579.294 kb on + strand at 2579.295 kb on - strand at 2579.295 kb on - strand at 2579.295 kb on - strand at 2579.296 kb on + strand at 2579.296 kb on + strand at 2579.326 kb on + strand at 2579.326 kb on + strand at 2579.326 kb on + strand at 2579.327 kb on - strand at 2579.374 kb on - strand at 2579.374 kb on - strand at 2579.461 kb on + strand at 2579.461 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 5.2896 mM remove 2,577,564 + AZOBR_RS12265 0.71 -0.8 2,577,564 + AZOBR_RS12265 0.71 -0.3 2,577,564 + AZOBR_RS12265 0.71 +1.0 2,577,565 - AZOBR_RS12265 0.71 -0.3 2,577,565 - AZOBR_RS12265 0.71 +0.6 2,577,565 - AZOBR_RS12265 0.71 -0.4 2,577,565 - AZOBR_RS12265 0.71 -0.4 2,577,565 - AZOBR_RS12265 0.71 -0.6 2,577,594 + AZOBR_RS12265 0.75 -1.5 2,577,594 + AZOBR_RS12265 0.75 -0.3 2,577,894 - AZOBR_RS12270 0.10 +1.0 2,577,916 + AZOBR_RS12270 0.13 -1.7 2,577,916 + AZOBR_RS12270 0.13 +0.5 2,577,916 + AZOBR_RS12270 0.13 -0.6 2,577,917 - AZOBR_RS12270 0.13 -0.8 2,578,015 + AZOBR_RS12270 0.27 -3.8 2,578,399 + AZOBR_RS12270 0.81 -0.0 2,579,106 + +0.2 2,579,168 + -1.5 2,579,169 - +0.3 2,579,170 + -0.4 2,579,283 + -0.0 2,579,294 + -0.4 2,579,294 + +0.4 2,579,294 + -0.8 2,579,294 + +1.0 2,579,294 + -0.8 2,579,295 - +0.1 2,579,295 - +2.0 2,579,295 - +0.6 2,579,296 + -2.2 2,579,296 + +0.0 2,579,326 + -0.9 2,579,326 + -0.4 2,579,326 + -1.4 2,579,327 - -0.5 2,579,374 - +0.1 2,579,374 - -0.0 2,579,461 + +1.0 2,579,461 + -0.9
Or see this region's nucleotide sequence