Experiment: 3-octanone 4.2317 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS29145 and AZOBR_RS29150 are separated by 51 nucleotides AZOBR_RS29150 and AZOBR_RS29155 are separated by 239 nucleotides
AZOBR_RS29145: AZOBR_RS29145 - peptidase, at 661,801 to 662,877
_RS29145
AZOBR_RS29150: AZOBR_RS29150 - TonB-denpendent receptor, at 662,929 to 665,322
_RS29150
AZOBR_RS29155: AZOBR_RS29155 - hypothetical protein, at 665,562 to 666,539
_RS29155
Position (kb) 662
663
664
665
666 Strain fitness (log2 ratio) -2
-1
0
1
2 at 661.937 kb on + strand, within AZOBR_RS29145 at 661.937 kb on + strand, within AZOBR_RS29145 at 661.938 kb on - strand, within AZOBR_RS29145 at 661.938 kb on - strand, within AZOBR_RS29145 at 662.178 kb on - strand, within AZOBR_RS29145 at 662.216 kb on + strand, within AZOBR_RS29145 at 662.384 kb on + strand, within AZOBR_RS29145 at 662.384 kb on + strand, within AZOBR_RS29145 at 662.384 kb on + strand, within AZOBR_RS29145 at 662.385 kb on - strand, within AZOBR_RS29145 at 662.984 kb on + strand at 662.984 kb on + strand at 663.009 kb on - strand at 663.009 kb on - strand at 663.140 kb on + strand at 663.356 kb on + strand, within AZOBR_RS29150 at 663.357 kb on - strand, within AZOBR_RS29150 at 663.404 kb on + strand, within AZOBR_RS29150 at 663.405 kb on - strand, within AZOBR_RS29150 at 663.405 kb on - strand, within AZOBR_RS29150 at 663.506 kb on + strand, within AZOBR_RS29150 at 663.506 kb on + strand, within AZOBR_RS29150 at 663.603 kb on - strand, within AZOBR_RS29150 at 663.701 kb on + strand, within AZOBR_RS29150 at 663.785 kb on + strand, within AZOBR_RS29150 at 663.881 kb on + strand, within AZOBR_RS29150 at 663.882 kb on - strand, within AZOBR_RS29150 at 664.094 kb on + strand, within AZOBR_RS29150 at 664.094 kb on + strand, within AZOBR_RS29150 at 664.094 kb on + strand, within AZOBR_RS29150 at 664.095 kb on - strand, within AZOBR_RS29150 at 664.137 kb on - strand, within AZOBR_RS29150 at 664.164 kb on - strand, within AZOBR_RS29150 at 664.205 kb on + strand, within AZOBR_RS29150 at 664.206 kb on - strand at 664.223 kb on + strand, within AZOBR_RS29150 at 664.268 kb on + strand, within AZOBR_RS29150 at 664.268 kb on + strand, within AZOBR_RS29150 at 664.269 kb on - strand, within AZOBR_RS29150 at 664.269 kb on - strand, within AZOBR_RS29150 at 664.269 kb on - strand, within AZOBR_RS29150 at 664.269 kb on - strand, within AZOBR_RS29150 at 664.269 kb on - strand, within AZOBR_RS29150 at 664.269 kb on - strand, within AZOBR_RS29150 at 664.269 kb on - strand, within AZOBR_RS29150 at 664.269 kb on - strand, within AZOBR_RS29150 at 664.346 kb on + strand, within AZOBR_RS29150 at 664.505 kb on + strand, within AZOBR_RS29150 at 664.505 kb on + strand, within AZOBR_RS29150 at 664.682 kb on + strand, within AZOBR_RS29150 at 664.682 kb on + strand, within AZOBR_RS29150 at 664.844 kb on + strand, within AZOBR_RS29150 at 664.845 kb on - strand, within AZOBR_RS29150 at 665.582 kb on - strand at 665.582 kb on - strand at 665.582 kb on - strand at 665.670 kb on + strand, within AZOBR_RS29155 at 665.670 kb on + strand, within AZOBR_RS29155 at 666.275 kb on + strand, within AZOBR_RS29155 at 666.276 kb on - strand, within AZOBR_RS29155 at 666.276 kb on - strand, within AZOBR_RS29155
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 4.2317 mM remove 661,937 + AZOBR_RS29145 0.13 -0.0 661,937 + AZOBR_RS29145 0.13 +1.3 661,938 - AZOBR_RS29145 0.13 +0.1 661,938 - AZOBR_RS29145 0.13 -0.5 662,178 - AZOBR_RS29145 0.35 +0.2 662,216 + AZOBR_RS29145 0.39 -0.1 662,384 + AZOBR_RS29145 0.54 +0.1 662,384 + AZOBR_RS29145 0.54 -0.2 662,384 + AZOBR_RS29145 0.54 +0.1 662,385 - AZOBR_RS29145 0.54 -0.1 662,984 + +0.4 662,984 + +0.8 663,009 - -0.5 663,009 - -0.2 663,140 + +1.0 663,356 + AZOBR_RS29150 0.18 -0.5 663,357 - AZOBR_RS29150 0.18 -0.4 663,404 + AZOBR_RS29150 0.20 +0.1 663,405 - AZOBR_RS29150 0.20 +0.3 663,405 - AZOBR_RS29150 0.20 -0.3 663,506 + AZOBR_RS29150 0.24 +1.5 663,506 + AZOBR_RS29150 0.24 -1.9 663,603 - AZOBR_RS29150 0.28 -0.9 663,701 + AZOBR_RS29150 0.32 -0.2 663,785 + AZOBR_RS29150 0.36 -0.2 663,881 + AZOBR_RS29150 0.40 +0.0 663,882 - AZOBR_RS29150 0.40 -1.0 664,094 + AZOBR_RS29150 0.49 +0.1 664,094 + AZOBR_RS29150 0.49 +0.9 664,094 + AZOBR_RS29150 0.49 -0.6 664,095 - AZOBR_RS29150 0.49 -0.5 664,137 - AZOBR_RS29150 0.50 -0.6 664,164 - AZOBR_RS29150 0.52 -0.1 664,205 + AZOBR_RS29150 0.53 +1.0 664,206 - +1.3 664,223 + AZOBR_RS29150 0.54 +0.4 664,268 + AZOBR_RS29150 0.56 -0.1 664,268 + AZOBR_RS29150 0.56 +2.3 664,269 - AZOBR_RS29150 0.56 +0.3 664,269 - AZOBR_RS29150 0.56 -0.4 664,269 - AZOBR_RS29150 0.56 +0.1 664,269 - AZOBR_RS29150 0.56 +0.5 664,269 - AZOBR_RS29150 0.56 -0.8 664,269 - AZOBR_RS29150 0.56 -0.6 664,269 - AZOBR_RS29150 0.56 +0.6 664,269 - AZOBR_RS29150 0.56 +0.3 664,346 + AZOBR_RS29150 0.59 -0.6 664,505 + AZOBR_RS29150 0.66 -0.1 664,505 + AZOBR_RS29150 0.66 +0.4 664,682 + AZOBR_RS29150 0.73 +0.0 664,682 + AZOBR_RS29150 0.73 +1.3 664,844 + AZOBR_RS29150 0.80 +0.5 664,845 - AZOBR_RS29150 0.80 -1.4 665,582 - -1.3 665,582 - -1.0 665,582 - +0.7 665,670 + AZOBR_RS29155 0.11 -0.6 665,670 + AZOBR_RS29155 0.11 -0.9 666,275 + AZOBR_RS29155 0.73 -1.4 666,276 - AZOBR_RS29155 0.73 -1.3 666,276 - AZOBR_RS29155 0.73 -0.7
Or see this region's nucleotide sequence