Experiment: 3-octanone 4.2317 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS18145 and AZOBR_RS18150 overlap by 19 nucleotides AZOBR_RS18150 and AZOBR_RS18155 are separated by 61 nucleotides AZOBR_RS18155 and AZOBR_RS18160 are separated by 70 nucleotides
AZOBR_RS18145: AZOBR_RS18145 - racemase, at 828,608 to 829,855
_RS18145
AZOBR_RS18150: AZOBR_RS18150 - membrane protein, at 829,837 to 830,988
_RS18150
AZOBR_RS18155: AZOBR_RS18155 - enoyl-CoA hydratase, at 831,050 to 831,796
_RS18155
AZOBR_RS18160: AZOBR_RS18160 - fumarylacetoacetate hydrolase, at 831,867 to 833,012
_RS18160
Position (kb) 829
830
831 Strain fitness (log2 ratio) -1
0
1
2 at 828.909 kb on - strand, within AZOBR_RS18145 at 828.909 kb on - strand, within AZOBR_RS18145 at 828.944 kb on + strand, within AZOBR_RS18145 at 828.945 kb on - strand, within AZOBR_RS18145 at 828.980 kb on + strand, within AZOBR_RS18145 at 829.016 kb on + strand, within AZOBR_RS18145 at 829.017 kb on - strand, within AZOBR_RS18145 at 829.115 kb on + strand, within AZOBR_RS18145 at 829.116 kb on - strand, within AZOBR_RS18145 at 829.139 kb on + strand, within AZOBR_RS18145 at 829.316 kb on + strand, within AZOBR_RS18145 at 829.317 kb on - strand, within AZOBR_RS18145 at 829.317 kb on - strand, within AZOBR_RS18145 at 829.560 kb on - strand, within AZOBR_RS18145 at 829.560 kb on - strand, within AZOBR_RS18145 at 829.560 kb on - strand, within AZOBR_RS18145 at 829.619 kb on + strand, within AZOBR_RS18145 at 829.620 kb on - strand, within AZOBR_RS18145 at 829.876 kb on + strand at 829.877 kb on - strand at 830.138 kb on - strand, within AZOBR_RS18150 at 830.522 kb on - strand, within AZOBR_RS18150 at 830.522 kb on - strand, within AZOBR_RS18150 at 830.530 kb on + strand, within AZOBR_RS18150 at 830.531 kb on - strand, within AZOBR_RS18150 at 830.797 kb on + strand, within AZOBR_RS18150 at 830.830 kb on + strand, within AZOBR_RS18150 at 830.830 kb on + strand, within AZOBR_RS18150 at 830.855 kb on - strand, within AZOBR_RS18150 at 830.855 kb on - strand, within AZOBR_RS18150 at 830.855 kb on - strand, within AZOBR_RS18150 at 830.951 kb on - strand at 831.278 kb on + strand, within AZOBR_RS18155 at 831.278 kb on + strand, within AZOBR_RS18155 at 831.278 kb on + strand, within AZOBR_RS18155 at 831.332 kb on + strand, within AZOBR_RS18155 at 831.695 kb on + strand, within AZOBR_RS18155 at 831.794 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 4.2317 mM remove 828,909 - AZOBR_RS18145 0.24 -0.2 828,909 - AZOBR_RS18145 0.24 +1.2 828,944 + AZOBR_RS18145 0.27 -0.1 828,945 - AZOBR_RS18145 0.27 -0.5 828,980 + AZOBR_RS18145 0.30 +0.2 829,016 + AZOBR_RS18145 0.33 +1.2 829,017 - AZOBR_RS18145 0.33 -0.3 829,115 + AZOBR_RS18145 0.41 +0.4 829,116 - AZOBR_RS18145 0.41 +0.4 829,139 + AZOBR_RS18145 0.43 +0.6 829,316 + AZOBR_RS18145 0.57 +0.1 829,317 - AZOBR_RS18145 0.57 -0.4 829,317 - AZOBR_RS18145 0.57 +2.2 829,560 - AZOBR_RS18145 0.76 -0.4 829,560 - AZOBR_RS18145 0.76 -0.4 829,560 - AZOBR_RS18145 0.76 +0.1 829,619 + AZOBR_RS18145 0.81 +0.4 829,620 - AZOBR_RS18145 0.81 -0.4 829,876 + +0.1 829,877 - +0.2 830,138 - AZOBR_RS18150 0.26 -0.2 830,522 - AZOBR_RS18150 0.59 +0.6 830,522 - AZOBR_RS18150 0.59 -0.4 830,530 + AZOBR_RS18150 0.60 +0.8 830,531 - AZOBR_RS18150 0.60 -0.0 830,797 + AZOBR_RS18150 0.83 -0.1 830,830 + AZOBR_RS18150 0.86 -0.2 830,830 + AZOBR_RS18150 0.86 -0.4 830,855 - AZOBR_RS18150 0.88 -0.8 830,855 - AZOBR_RS18150 0.88 -0.8 830,855 - AZOBR_RS18150 0.88 -0.0 830,951 - -0.6 831,278 + AZOBR_RS18155 0.31 +1.2 831,278 + AZOBR_RS18155 0.31 -0.5 831,278 + AZOBR_RS18155 0.31 +1.2 831,332 + AZOBR_RS18155 0.38 -0.4 831,695 + AZOBR_RS18155 0.86 -0.6 831,794 + -0.4
Or see this region's nucleotide sequence