Experiment: 3-octanone 4.2317 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS24375 and AZOBR_RS24380 overlap by 4 nucleotides AZOBR_RS24380 and AZOBR_RS24385 are separated by 56 nucleotides AZOBR_RS24385 and AZOBR_RS24390 are separated by 50 nucleotides
AZOBR_RS24375: AZOBR_RS24375 - membrane protein, at 518,183 to 519,262
_RS24375
AZOBR_RS24380: AZOBR_RS24380 - hypothetical protein, at 519,259 to 520,200
_RS24380
AZOBR_RS24385: AZOBR_RS24385 - TPR repeat-containing protein, at 520,257 to 520,835
_RS24385
AZOBR_RS24390: AZOBR_RS24390 - hypothetical protein, at 520,886 to 522,190
_RS24390
Position (kb) 519
520
521 Strain fitness (log2 ratio) -1
0
1
2 at 519.056 kb on + strand, within AZOBR_RS24375 at 519.057 kb on - strand, within AZOBR_RS24375 at 519.057 kb on - strand, within AZOBR_RS24375 at 519.057 kb on - strand, within AZOBR_RS24375 at 519.451 kb on - strand, within AZOBR_RS24380 at 520.314 kb on - strand at 520.450 kb on - strand, within AZOBR_RS24385 at 520.644 kb on + strand, within AZOBR_RS24385 at 520.644 kb on + strand, within AZOBR_RS24385 at 520.782 kb on + strand at 521.150 kb on + strand, within AZOBR_RS24390 at 521.150 kb on + strand, within AZOBR_RS24390 at 521.150 kb on + strand, within AZOBR_RS24390 at 521.150 kb on + strand, within AZOBR_RS24390 at 521.151 kb on - strand, within AZOBR_RS24390 at 521.180 kb on + strand, within AZOBR_RS24390 at 521.180 kb on + strand, within AZOBR_RS24390
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 4.2317 mM remove 519,056 + AZOBR_RS24375 0.81 -0.1 519,057 - AZOBR_RS24375 0.81 +0.1 519,057 - AZOBR_RS24375 0.81 -0.1 519,057 - AZOBR_RS24375 0.81 -0.0 519,451 - AZOBR_RS24380 0.20 -0.8 520,314 - -0.1 520,450 - AZOBR_RS24385 0.33 +0.5 520,644 + AZOBR_RS24385 0.67 -0.9 520,644 + AZOBR_RS24385 0.67 -0.4 520,782 + -0.2 521,150 + AZOBR_RS24390 0.20 +1.0 521,150 + AZOBR_RS24390 0.20 -0.0 521,150 + AZOBR_RS24390 0.20 +0.7 521,150 + AZOBR_RS24390 0.20 +2.0 521,151 - AZOBR_RS24390 0.20 -0.1 521,180 + AZOBR_RS24390 0.23 -0.2 521,180 + AZOBR_RS24390 0.23 -1.0
Or see this region's nucleotide sequence