Experiment: 3-octanone 4.2317 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS13150 and AZOBR_RS13155 are separated by 46 nucleotides AZOBR_RS13155 and AZOBR_RS13160 are separated by 60 nucleotides
AZOBR_RS13150: AZOBR_RS13150 - ABC transporter substrate-binding protein, at 2,774,026 to 2,775,030
_RS13150
AZOBR_RS13155: AZOBR_RS13155 - acyl-CoA dehydrogenase, at 2,775,077 to 2,776,303
_RS13155
AZOBR_RS13160: AZOBR_RS13160 - histidine kinase, at 2,776,364 to 2,778,106
_RS13160
Position (kb)
2775
2776
2777 Strain fitness (log2 ratio)
-1
0
1 at 2774.690 kb on - strand, within AZOBR_RS13150 at 2774.690 kb on - strand, within AZOBR_RS13150 at 2774.830 kb on + strand, within AZOBR_RS13150 at 2774.830 kb on + strand, within AZOBR_RS13150 at 2774.831 kb on - strand, within AZOBR_RS13150 at 2774.831 kb on - strand, within AZOBR_RS13150 at 2774.831 kb on - strand, within AZOBR_RS13150 at 2774.831 kb on - strand, within AZOBR_RS13150 at 2774.831 kb on - strand, within AZOBR_RS13150 at 2774.831 kb on - strand, within AZOBR_RS13150 at 2774.941 kb on + strand at 2774.941 kb on + strand at 2774.942 kb on - strand at 2775.123 kb on + strand at 2775.389 kb on + strand, within AZOBR_RS13155 at 2775.389 kb on + strand, within AZOBR_RS13155 at 2775.593 kb on + strand, within AZOBR_RS13155 at 2775.593 kb on + strand, within AZOBR_RS13155 at 2775.887 kb on + strand, within AZOBR_RS13155 at 2776.252 kb on + strand at 2776.253 kb on - strand at 2776.253 kb on - strand at 2776.470 kb on + strand at 2776.471 kb on - strand at 2776.687 kb on - strand, within AZOBR_RS13160 at 2776.687 kb on - strand, within AZOBR_RS13160 at 2776.801 kb on - strand, within AZOBR_RS13160 at 2777.127 kb on + strand, within AZOBR_RS13160 at 2777.221 kb on - strand, within AZOBR_RS13160 at 2777.260 kb on - strand, within AZOBR_RS13160 at 2777.260 kb on - strand, within AZOBR_RS13160 at 2777.260 kb on - strand, within AZOBR_RS13160 at 2777.260 kb on - strand, within AZOBR_RS13160
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 4.2317 mM remove 2,774,690 - AZOBR_RS13150 0.66 -0.1 2,774,690 - AZOBR_RS13150 0.66 -0.1 2,774,830 + AZOBR_RS13150 0.80 -0.0 2,774,830 + AZOBR_RS13150 0.80 -0.2 2,774,831 - AZOBR_RS13150 0.80 -0.2 2,774,831 - AZOBR_RS13150 0.80 -0.1 2,774,831 - AZOBR_RS13150 0.80 +0.7 2,774,831 - AZOBR_RS13150 0.80 -0.1 2,774,831 - AZOBR_RS13150 0.80 -0.4 2,774,831 - AZOBR_RS13150 0.80 +0.9 2,774,941 + +1.0 2,774,941 + -0.4 2,774,942 - -0.6 2,775,123 + -0.2 2,775,389 + AZOBR_RS13155 0.25 -0.4 2,775,389 + AZOBR_RS13155 0.25 -0.7 2,775,593 + AZOBR_RS13155 0.42 +0.0 2,775,593 + AZOBR_RS13155 0.42 -1.0 2,775,887 + AZOBR_RS13155 0.66 +0.2 2,776,252 + -0.4 2,776,253 - +0.2 2,776,253 - -0.4 2,776,470 + +0.6 2,776,471 - -0.3 2,776,687 - AZOBR_RS13160 0.19 +0.6 2,776,687 - AZOBR_RS13160 0.19 -0.7 2,776,801 - AZOBR_RS13160 0.25 -0.3 2,777,127 + AZOBR_RS13160 0.44 +0.3 2,777,221 - AZOBR_RS13160 0.49 +0.8 2,777,260 - AZOBR_RS13160 0.51 -1.4 2,777,260 - AZOBR_RS13160 0.51 -1.5 2,777,260 - AZOBR_RS13160 0.51 +0.1 2,777,260 - AZOBR_RS13160 0.51 +0.3
Or see this region's nucleotide sequence