Experiment: 3-octanone 4.2317 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS00895 and AZOBR_RS00900 are separated by 122 nucleotides AZOBR_RS00900 and AZOBR_RS00905 are separated by 21 nucleotides AZOBR_RS00905 and AZOBR_RS00910 are separated by 179 nucleotides
AZOBR_RS00895: AZOBR_RS00895 - phenylalanyl-tRNA synthetase subunit alpha, at 179,363 to 180,430
_RS00895
AZOBR_RS00900: AZOBR_RS00900 - 50S ribosomal protein L20, at 180,553 to 180,924
_RS00900
AZOBR_RS00905: AZOBR_RS00905 - 50S ribosomal protein L35, at 180,946 to 181,146
_RS00905
AZOBR_RS00910: AZOBR_RS00910 - proline iminopeptidase, at 181,326 to 182,276
_RS00910
Position (kb) 180
181 Strain fitness (log2 ratio) -1
0
1 at 180.466 kb on - strand at 181.321 kb on - strand at 181.333 kb on + strand at 181.334 kb on - strand at 181.484 kb on - strand, within AZOBR_RS00910 at 181.576 kb on + strand, within AZOBR_RS00910 at 181.576 kb on + strand, within AZOBR_RS00910 at 181.577 kb on - strand, within AZOBR_RS00910 at 181.675 kb on + strand, within AZOBR_RS00910 at 181.741 kb on + strand, within AZOBR_RS00910 at 181.742 kb on - strand, within AZOBR_RS00910 at 181.742 kb on - strand, within AZOBR_RS00910 at 181.828 kb on + strand, within AZOBR_RS00910
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 4.2317 mM remove 180,466 - +0.5 181,321 - +0.5 181,333 + -0.1 181,334 - -0.3 181,484 - AZOBR_RS00910 0.17 -0.5 181,576 + AZOBR_RS00910 0.26 -1.0 181,576 + AZOBR_RS00910 0.26 -0.5 181,577 - AZOBR_RS00910 0.26 -0.9 181,675 + AZOBR_RS00910 0.37 -0.2 181,741 + AZOBR_RS00910 0.44 -0.4 181,742 - AZOBR_RS00910 0.44 -0.3 181,742 - AZOBR_RS00910 0.44 -0.3 181,828 + AZOBR_RS00910 0.53 +0.3
Or see this region's nucleotide sequence