Experiment: 2-pentyl-furan 1.335528 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS27565 and AZOBR_RS27570 are separated by 84 nucleotides AZOBR_RS27570 and AZOBR_RS27575 are separated by 51 nucleotides AZOBR_RS27575 and AZOBR_RS27580 are separated by 15 nucleotides AZOBR_RS27580 and AZOBR_RS27585 are separated by 40 nucleotides
AZOBR_RS27565: AZOBR_RS27565 - GntR family transcriptional regulator, at 345,649 to 347,049
_RS27565
AZOBR_RS27570: AZOBR_RS27570 - MerR family transcriptional regulator, at 347,134 to 347,565
_RS27570
AZOBR_RS27575: AZOBR_RS27575 - arsenic resistance protein, at 347,617 to 348,579
_RS27575
AZOBR_RS27580: AZOBR_RS27580 - oxidoreductase, at 348,595 to 349,296
_RS27580
AZOBR_RS27585: AZOBR_RS27585 - ABC transporter substrate-binding protein, at 349,337 to 350,422
_RS27585
Position (kb) 347
348
349 Strain fitness (log2 ratio) -2
-1
0
1
2 at 346.846 kb on + strand, within AZOBR_RS27565 at 346.846 kb on + strand, within AZOBR_RS27565 at 346.846 kb on + strand, within AZOBR_RS27565 at 346.890 kb on - strand, within AZOBR_RS27565 at 346.966 kb on + strand at 346.966 kb on + strand at 347.047 kb on + strand at 347.048 kb on - strand at 347.052 kb on + strand at 347.206 kb on + strand, within AZOBR_RS27570 at 347.207 kb on - strand, within AZOBR_RS27570 at 347.254 kb on + strand, within AZOBR_RS27570 at 347.254 kb on + strand, within AZOBR_RS27570 at 347.761 kb on + strand, within AZOBR_RS27575 at 347.762 kb on - strand, within AZOBR_RS27575 at 347.956 kb on + strand, within AZOBR_RS27575 at 347.957 kb on - strand, within AZOBR_RS27575 at 347.957 kb on - strand, within AZOBR_RS27575 at 348.056 kb on - strand, within AZOBR_RS27575 at 348.325 kb on + strand, within AZOBR_RS27575 at 348.541 kb on + strand at 348.541 kb on + strand at 348.542 kb on - strand at 348.542 kb on - strand at 349.347 kb on + strand at 349.347 kb on + strand at 349.347 kb on + strand at 349.348 kb on - strand at 349.348 kb on - strand at 349.348 kb on - strand at 349.348 kb on - strand at 349.348 kb on - strand at 349.348 kb on - strand at 349.348 kb on - strand at 349.416 kb on + strand at 349.416 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.335528 mM remove 346,846 + AZOBR_RS27565 0.85 -2.3 346,846 + AZOBR_RS27565 0.85 -2.1 346,846 + AZOBR_RS27565 0.85 +0.0 346,890 - AZOBR_RS27565 0.89 -0.3 346,966 + -0.1 346,966 + -0.4 347,047 + -0.9 347,048 - +0.2 347,052 + +2.5 347,206 + AZOBR_RS27570 0.17 +0.1 347,207 - AZOBR_RS27570 0.17 -0.9 347,254 + AZOBR_RS27570 0.28 -1.3 347,254 + AZOBR_RS27570 0.28 +2.3 347,761 + AZOBR_RS27575 0.15 +0.7 347,762 - AZOBR_RS27575 0.15 -0.9 347,956 + AZOBR_RS27575 0.35 -0.2 347,957 - AZOBR_RS27575 0.35 -1.8 347,957 - AZOBR_RS27575 0.35 -0.5 348,056 - AZOBR_RS27575 0.46 +1.3 348,325 + AZOBR_RS27575 0.74 +1.2 348,541 + -0.1 348,541 + -0.0 348,542 - +0.2 348,542 - +0.7 349,347 + -0.8 349,347 + -0.6 349,347 + -0.9 349,348 - +0.0 349,348 - +0.4 349,348 - -0.4 349,348 - -0.3 349,348 - +0.0 349,348 - -0.3 349,348 - +0.6 349,416 + -0.0 349,416 + +0.5
Or see this region's nucleotide sequence