Experiment: 2-pentyl-furan 1.335528 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS26605 and AZOBR_RS26610 are separated by 159 nucleotides AZOBR_RS26610 and AZOBR_RS26615 are separated by 20 nucleotides AZOBR_RS26615 and AZOBR_RS26620 are separated by 244 nucleotides
AZOBR_RS26605: AZOBR_RS26605 - TonB-denpendent receptor, at 112,582 to 115,071
_RS26605
AZOBR_RS26610: AZOBR_RS26610 - iron dicitrate transport regulator FecR, at 115,231 to 116,274
_RS26610
AZOBR_RS26615: AZOBR_RS26615 - RNA polymerase, at 116,295 to 116,888
_RS26615
AZOBR_RS26620: AZOBR_RS26620 - putative transcriptional regulator GntR family, at 117,133 to 117,807
_RS26620
Position (kb)
115
116
117 Strain fitness (log2 ratio)
-2
-1
0
1 at 114.350 kb on + strand, within AZOBR_RS26605 at 114.350 kb on + strand, within AZOBR_RS26605 at 114.351 kb on - strand, within AZOBR_RS26605 at 114.351 kb on - strand, within AZOBR_RS26605 at 114.351 kb on - strand, within AZOBR_RS26605 at 114.464 kb on + strand, within AZOBR_RS26605 at 114.464 kb on + strand, within AZOBR_RS26605 at 114.464 kb on + strand, within AZOBR_RS26605 at 114.465 kb on - strand, within AZOBR_RS26605 at 114.465 kb on - strand, within AZOBR_RS26605 at 114.465 kb on - strand, within AZOBR_RS26605 at 114.597 kb on - strand, within AZOBR_RS26605 at 114.597 kb on - strand, within AZOBR_RS26605 at 114.713 kb on + strand, within AZOBR_RS26605 at 114.960 kb on - strand at 115.050 kb on + strand at 115.246 kb on + strand at 115.397 kb on + strand, within AZOBR_RS26610 at 115.397 kb on + strand, within AZOBR_RS26610 at 115.622 kb on + strand, within AZOBR_RS26610 at 115.622 kb on + strand, within AZOBR_RS26610 at 115.623 kb on - strand, within AZOBR_RS26610 at 116.313 kb on + strand at 116.313 kb on + strand at 116.313 kb on + strand at 116.314 kb on - strand at 116.314 kb on - strand at 116.314 kb on - strand at 116.764 kb on + strand, within AZOBR_RS26615 at 116.765 kb on - strand, within AZOBR_RS26615 at 116.765 kb on - strand, within AZOBR_RS26615 at 116.765 kb on - strand, within AZOBR_RS26615 at 117.134 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.335528 mM remove 114,350 + AZOBR_RS26605 0.71 -0.4 114,350 + AZOBR_RS26605 0.71 -0.8 114,351 - AZOBR_RS26605 0.71 +0.0 114,351 - AZOBR_RS26605 0.71 -2.2 114,351 - AZOBR_RS26605 0.71 -0.5 114,464 + AZOBR_RS26605 0.76 -0.0 114,464 + AZOBR_RS26605 0.76 +0.2 114,464 + AZOBR_RS26605 0.76 -2.1 114,465 - AZOBR_RS26605 0.76 +0.2 114,465 - AZOBR_RS26605 0.76 +1.0 114,465 - AZOBR_RS26605 0.76 -0.2 114,597 - AZOBR_RS26605 0.81 -0.2 114,597 - AZOBR_RS26605 0.81 +0.8 114,713 + AZOBR_RS26605 0.86 +0.2 114,960 - -1.2 115,050 + -0.3 115,246 + -2.3 115,397 + AZOBR_RS26610 0.16 +0.3 115,397 + AZOBR_RS26610 0.16 +0.1 115,622 + AZOBR_RS26610 0.37 +1.0 115,622 + AZOBR_RS26610 0.37 +0.0 115,623 - AZOBR_RS26610 0.38 +0.3 116,313 + -1.3 116,313 + -0.2 116,313 + -0.5 116,314 - -0.7 116,314 - +0.3 116,314 - -0.4 116,764 + AZOBR_RS26615 0.79 -0.8 116,765 - AZOBR_RS26615 0.79 +0.4 116,765 - AZOBR_RS26615 0.79 -1.7 116,765 - AZOBR_RS26615 0.79 -0.9 117,134 + -0.7
Or see this region's nucleotide sequence