Experiment: 2-pentyl-furan 1.335528 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS09940 and AZOBR_RS09945 are separated by 109 nucleotides AZOBR_RS09945 and AZOBR_RS09950 are separated by 109 nucleotides AZOBR_RS09950 and AZOBR_RS09955 are separated by 107 nucleotides
AZOBR_RS09940: AZOBR_RS09940 - 5'-methylthioadenosine phosphorylase, at 2,087,326 to 2,088,210
_RS09940
AZOBR_RS09945: AZOBR_RS09945 - hypothetical protein, at 2,088,320 to 2,088,733
_RS09945
AZOBR_RS09950: AZOBR_RS09950 - pseudouridine-5'-phosphate glycosidase, at 2,088,843 to 2,089,763
_RS09950
AZOBR_RS09955: AZOBR_RS09955 - beta-lactamase, at 2,089,871 to 2,090,899
_RS09955
Position (kb)
2088
2089
2090 Strain fitness (log2 ratio)
-2
-1
0
1 at 2088.348 kb on + strand at 2088.813 kb on + strand at 2088.821 kb on - strand at 2088.835 kb on - strand at 2088.863 kb on - strand at 2089.193 kb on - strand, within AZOBR_RS09950 at 2089.451 kb on + strand, within AZOBR_RS09950 at 2089.517 kb on + strand, within AZOBR_RS09950 at 2089.517 kb on + strand, within AZOBR_RS09950 at 2089.518 kb on - strand, within AZOBR_RS09950 at 2089.859 kb on - strand at 2089.859 kb on - strand at 2089.859 kb on - strand at 2089.861 kb on - strand at 2089.937 kb on + strand at 2089.959 kb on - strand at 2089.959 kb on - strand at 2090.121 kb on - strand, within AZOBR_RS09955 at 2090.241 kb on - strand, within AZOBR_RS09955 at 2090.418 kb on - strand, within AZOBR_RS09955 at 2090.484 kb on - strand, within AZOBR_RS09955 at 2090.484 kb on - strand, within AZOBR_RS09955 at 2090.519 kb on + strand, within AZOBR_RS09955 at 2090.520 kb on - strand, within AZOBR_RS09955 at 2090.520 kb on - strand, within AZOBR_RS09955 at 2090.520 kb on - strand, within AZOBR_RS09955 at 2090.520 kb on - strand, within AZOBR_RS09955 at 2090.520 kb on - strand, within AZOBR_RS09955
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.335528 mM remove 2,088,348 + -1.0 2,088,813 + +0.1 2,088,821 - -0.4 2,088,835 - +0.7 2,088,863 - -0.4 2,089,193 - AZOBR_RS09950 0.38 -0.3 2,089,451 + AZOBR_RS09950 0.66 -0.6 2,089,517 + AZOBR_RS09950 0.73 -1.4 2,089,517 + AZOBR_RS09950 0.73 +0.6 2,089,518 - AZOBR_RS09950 0.73 +0.1 2,089,859 - -0.1 2,089,859 - -0.3 2,089,859 - -0.1 2,089,861 - +0.7 2,089,937 + +0.4 2,089,959 - -0.5 2,089,959 - -0.2 2,090,121 - AZOBR_RS09955 0.24 -0.8 2,090,241 - AZOBR_RS09955 0.36 -0.7 2,090,418 - AZOBR_RS09955 0.53 -1.8 2,090,484 - AZOBR_RS09955 0.60 +0.6 2,090,484 - AZOBR_RS09955 0.60 -0.6 2,090,519 + AZOBR_RS09955 0.63 -0.3 2,090,520 - AZOBR_RS09955 0.63 -1.4 2,090,520 - AZOBR_RS09955 0.63 -0.2 2,090,520 - AZOBR_RS09955 0.63 -0.3 2,090,520 - AZOBR_RS09955 0.63 -0.5 2,090,520 - AZOBR_RS09955 0.63 -0.9
Or see this region's nucleotide sequence