Experiment: 2-pentyl-furan 1.335528 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS09515 and AZOBR_RS09520 are separated by 54 nucleotides AZOBR_RS09520 and AZOBR_RS09525 are separated by 193 nucleotides AZOBR_RS09525 and AZOBR_RS09530 are separated by 93 nucleotides
AZOBR_RS09515: AZOBR_RS09515 - heme ABC transporter ATP-binding protein, at 1,991,415 to 1,993,091
_RS09515
AZOBR_RS09520: AZOBR_RS09520 - hypothetical protein, at 1,993,146 to 1,994,627
_RS09520
AZOBR_RS09525: AZOBR_RS09525 - toluene tolerance protein, at 1,994,821 to 1,995,438
_RS09525
AZOBR_RS09530: AZOBR_RS09530 - VacJ-like lipoprotein, at 1,995,532 to 1,996,308
_RS09530
Position (kb) 1993
1994
1995 Strain fitness (log2 ratio) -2
-1
0
1
2 at 1992.150 kb on + strand, within AZOBR_RS09515 at 1992.151 kb on - strand, within AZOBR_RS09515 at 1992.151 kb on - strand, within AZOBR_RS09515 at 1993.068 kb on + strand at 1993.068 kb on + strand at 1993.068 kb on + strand at 1993.068 kb on + strand at 1993.211 kb on - strand at 1993.358 kb on - strand, within AZOBR_RS09520 at 1993.438 kb on + strand, within AZOBR_RS09520 at 1993.976 kb on - strand, within AZOBR_RS09520 at 1994.020 kb on + strand, within AZOBR_RS09520 at 1994.021 kb on - strand, within AZOBR_RS09520 at 1994.491 kb on - strand at 1994.681 kb on - strand at 1994.785 kb on + strand at 1994.785 kb on + strand at 1994.785 kb on + strand at 1994.785 kb on + strand at 1994.785 kb on + strand at 1994.785 kb on + strand at 1994.786 kb on - strand at 1994.786 kb on - strand at 1994.964 kb on - strand, within AZOBR_RS09525 at 1995.099 kb on - strand, within AZOBR_RS09525 at 1995.156 kb on - strand, within AZOBR_RS09525 at 1995.219 kb on - strand, within AZOBR_RS09525 at 1995.239 kb on + strand, within AZOBR_RS09525 at 1995.533 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.335528 mM remove 1,992,150 + AZOBR_RS09515 0.44 -0.6 1,992,151 - AZOBR_RS09515 0.44 -0.9 1,992,151 - AZOBR_RS09515 0.44 -0.9 1,993,068 + +0.1 1,993,068 + -0.1 1,993,068 + -1.3 1,993,068 + -0.5 1,993,211 - +0.3 1,993,358 - AZOBR_RS09520 0.14 -0.3 1,993,438 + AZOBR_RS09520 0.20 -1.6 1,993,976 - AZOBR_RS09520 0.56 -0.0 1,994,020 + AZOBR_RS09520 0.59 +0.3 1,994,021 - AZOBR_RS09520 0.59 +0.4 1,994,491 - +1.2 1,994,681 - +0.7 1,994,785 + -0.1 1,994,785 + -0.4 1,994,785 + -0.6 1,994,785 + +0.4 1,994,785 + +0.3 1,994,785 + +1.1 1,994,786 - -1.1 1,994,786 - -0.4 1,994,964 - AZOBR_RS09525 0.23 +0.3 1,995,099 - AZOBR_RS09525 0.45 +2.3 1,995,156 - AZOBR_RS09525 0.54 -0.9 1,995,219 - AZOBR_RS09525 0.64 -2.0 1,995,239 + AZOBR_RS09525 0.68 -0.5 1,995,533 + -0.7
Or see this region's nucleotide sequence